Uses of Class
org.biojava.bio.seq.db.AbstractSequenceDB
Packages that use AbstractSequenceDB
Package
Description
Collections of biological sequence data.
Sequences and SequenceDBs which are composed from data taken
from a number of data sources.
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Uses of AbstractSequenceDB in org.biojava.bio.seq.db
Subclasses of AbstractSequenceDB in org.biojava.bio.seq.dbModifier and TypeClassDescriptionclass
SequenceDB implementation which lazily applies a SequenceAnnotator to sequences retrieved from a SequenceDB.class
SequenceDB implementation that caches the results of another SequenceDB.class
DummySequenceDB
is an implementation which contains only aDummySequence
.class
An implementation of SequenceDB that uses an underlying HashMap to store the sequence objects.final class
This class implements SequenceDB on top of a set of sequence files and sequence offsets within these files.class
An abstract implementation of SequenceDB that wraps up another database.class
class
SequenceDB implementation that returns new SequenceView instances wrapping the sequences in an underlying database. -
Uses of AbstractSequenceDB in org.biojava.bio.seq.distributed
Subclasses of AbstractSequenceDB in org.biojava.bio.seq.distributedModifier and TypeClassDescriptionclass
Sequence database from the meta-DAS system.