Uses of Interface
org.biojavax.bio.seq.RichSequenceHandler
Packages that use RichSequenceHandler
Package
Description
The Biojava extensions packages, classes that extend the core biojava
functionality
Interface between biojava and biosql databases
Rich implementations of Sequences, Locations and Features.
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Uses of RichSequenceHandler in org.biojavax
Methods in org.biojavax that return RichSequenceHandlerModifier and TypeMethodDescriptionstatic RichSequenceHandler
RichObjectFactory.getDefaultRichSequenceHandler()
Returns the default sequence resolver object.Methods in org.biojavax with parameters of type RichSequenceHandlerModifier and TypeMethodDescriptionstatic void
RichObjectFactory.setDefaultRichSequenceHandler
(RichSequenceHandler rsh) Sets the default sequence handler to use when performing sequence manipulation. -
Uses of RichSequenceHandler in org.biojavax.bio.db.biosql
Classes in org.biojavax.bio.db.biosql that implement RichSequenceHandlerModifier and TypeClassDescriptionclass
A handler which loads sequence data from a BioSQL database, caching it where possible. -
Uses of RichSequenceHandler in org.biojavax.bio.seq
Classes in org.biojavax.bio.seq that implement RichSequenceHandler