Package org.biojava.bio.seq
Class FeatureFilter.AnnotationContains
java.lang.Object
org.biojava.bio.seq.FeatureFilter.ByAnnotationType
org.biojava.bio.seq.FeatureFilter.AnnotationContains
- All Implemented Interfaces:
Serializable
,FeatureFilter
,OptimizableFilter
- Enclosing interface:
FeatureFilter
Retrieve features that contain a given annotation, and that the set of values
contains the value given.
- Since:
- 1.3
- Author:
- Thomas Down
- See Also:
-
Nested Class Summary
Nested classes/interfaces inherited from interface org.biojava.bio.seq.FeatureFilter
FeatureFilter.And, FeatureFilter.AnnotationContains, FeatureFilter.ByAncestor, FeatureFilter.ByAnnotation, FeatureFilter.ByAnnotationType, FeatureFilter.ByChild, FeatureFilter.ByClass, FeatureFilter.ByComponentName, FeatureFilter.ByDescendant, FeatureFilter.ByFeature, FeatureFilter.ByPairwiseScore, FeatureFilter.ByParent, FeatureFilter.BySequenceName, FeatureFilter.BySource, FeatureFilter.ByType, FeatureFilter.ContainedByLocation, FeatureFilter.FrameFilter, FeatureFilter.HasAnnotation, FeatureFilter.Not, FeatureFilter.OnlyChildren, FeatureFilter.OnlyDescendants, FeatureFilter.Or, FeatureFilter.OverlapsLocation, FeatureFilter.ShadowContainedByLocation, FeatureFilter.ShadowOverlapsLocation, FeatureFilter.StrandFilter
-
Field Summary
Fields inherited from interface org.biojava.bio.seq.FeatureFilter
all, leaf, none, top_level
-
Constructor Summary
ConstructorsConstructorDescriptionAnnotationContains
(Object key, Object value) Make a new AnnotationContains that will accept features with an annotation bundle where the value-set assosiated with the propertykey
contains a member equal tovalue
. -
Method Summary
Methods inherited from class org.biojava.bio.seq.FeatureFilter.ByAnnotationType
accept, equals, getType, hashCode, isDisjoint, isProperSubset, setType, toString
-
Constructor Details
-
AnnotationContains
Make a new AnnotationContains that will accept features with an annotation bundle where the value-set assosiated with the propertykey
contains a member equal tovalue
.- Parameters:
key
- the Object used as a key in the annotationvalue
- the Object associated with key in the annotation
-
-
Method Details
-
getKey
-
getValue
-