Package org.biojava.bio.seq.homol
package org.biojava.bio.seq.homol
The classes and interfaces for defining sequence similarity and honology.
-
ClassDescriptionSignifies that two or more features are homologous.
SimilarityPairFeature
describes a pairwise similarity between two nucleotide sequences (as it extendsStrandedFeature
).EmptyPairwiseAlignment
empty pairwise alignment which has labels to empty symbol lists.Template
for construction ofSimilarityPairFeature
s.A no-frills implementation of Homology.