Package org.biojava.bio.seq.io.game
Class SequenceContentHandlerBase
java.lang.Object
org.biojava.utils.stax.StAXContentHandlerBase
org.biojava.bio.seq.io.game.SequenceContentHandlerBase
- All Implemented Interfaces:
StAXContentHandler
- Direct Known Subclasses:
GAMEResiduesPropHandler
StAX handler for elements containing sequence
- Since:
- 1.8
- Author:
- David Huen
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Constructor Summary
Constructors -
Method Summary
Modifier and TypeMethodDescriptionvoid
characters
(char[] ch, int start, int length) Signal a span of character data in the XML input.void
endElement
(String nsURI, String localName, String qName, StAXContentHandler handler) void
setStreamParser
(StreamParser parser) assign a StreamParser object to instance.void
startElement
(String nsURI, String localName, String qName, Attributes attrs, DelegationManager dm) Methods inherited from class org.biojava.utils.stax.StAXContentHandlerBase
endPrefixMapping, endTree, ignorableWhitespace, processingInstruction, setDocumentLocator, skippedEntity, startPrefixMapping, startTree
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Constructor Details
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SequenceContentHandlerBase
public SequenceContentHandlerBase()
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Method Details
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startElement
public void startElement(String nsURI, String localName, String qName, Attributes attrs, DelegationManager dm) throws SAXException - Specified by:
startElement
in interfaceStAXContentHandler
- Overrides:
startElement
in classStAXContentHandlerBase
- Throws:
SAXException
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endElement
public void endElement(String nsURI, String localName, String qName, StAXContentHandler handler) throws SAXException - Specified by:
endElement
in interfaceStAXContentHandler
- Overrides:
endElement
in classStAXContentHandlerBase
- Throws:
SAXException
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setStreamParser
assign a StreamParser object to instance. -
characters
Description copied from class:StAXContentHandlerBase
Signal a span of character data in the XML input.- Specified by:
characters
in interfaceStAXContentHandler
- Overrides:
characters
in classStAXContentHandlerBase
- Parameters:
ch
- an array of charactersstart
- index of the first significant character for this event.length
- number of characters significant to this event.- Throws:
SAXException
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