Class EmblLikeFormat

java.lang.Object
org.biojava.bio.seq.io.EmblLikeFormat
All Implemented Interfaces:
Serializable, EventListener, SequenceFormat, ParseErrorListener, ParseErrorSource

Deprecated.
Use org.biojavax.bio.seq.io.EMBLFormat instead

Format processor for handling EMBL records and similar files. This takes a very simple approach: all `normal' attribute lines are passed to the listener as a tag (first two characters) and a value (the rest of the line from the 6th character onwards). Any data between the special `SQ' line and the "//" entry terminator is passed as a SymbolReader.

This low-level format processor should normally be used in conjunction with one or more `filter' objects, such as EmblProcessor.

Many ideas borrowed from the old EmblFormat processor by Thomas Down and Thad Welch.

Since:
1.1
Author:
Thomas Down, Greg Cox, Keith James, Len Trigg, Lorna Morris
See Also: