Uses of Class
org.biojava.bio.program.phred.PhredSequence
Packages that use PhredSequence
Package
Description
FASTQ and variants sequence format I/O.
Parser for Phred output
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Uses of PhredSequence in org.biojava.bio.program.fastq
Methods in org.biojava.bio.program.fastq that return PhredSequenceModifier and TypeMethodDescriptionstatic PhredSequence
FastqTools.createPhredSequence
(Fastq fastq) Create and return a newPhredSequence
from the specified FASTQ formatted sequence. -
Uses of PhredSequence in org.biojava.bio.program.phred
Methods in org.biojava.bio.program.phred with parameters of type PhredSequenceModifier and TypeMethodDescriptionstatic Distribution[]
PhredTools.phredToDistArray
(PhredSequence s) Converts a Phred sequence to an array of distributions.