Uses of Package
org.biojava.bio.program.tagvalue
Packages that use org.biojava.bio.program.tagvalue
Package
Description
The core classes that will be used throughout the bio packages.
Databases of generic structured data (annotation) objects.
Experimental parsers using the tagvalue framework.
Process files as streams of records, each with tags with values.
Objects for representing Unigene clusters.
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Classes in org.biojava.bio.program.tagvalue used by org.biojava.bioClassDescriptionA mapping between keys and actions to turn old values into new values.Interface for objects that change tag names or properties systematically.
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Classes in org.biojava.bio.program.tagvalue used by org.biojava.bio.annodbClassDescription
ParserListener
is an immutable pairing of a parser and listener.An object that wishes to be informed of events during the parsing of a file. -
Classes in org.biojava.bio.program.tagvalue used by org.biojava.bio.program.formatsClassDescriptionCallback used to produce a new value from an old one.
ParserListener
is an immutable pairing of a parser and listener.An object that wishes to be informed of events during the parsing of a file. -
Classes in org.biojava.bio.program.tagvalue used by org.biojava.bio.program.tagvalueClassDescriptionA mapping between keys and actions to turn old values into new values.Callback used to produce a new value from an old one.Callback used to produce a list of values from a single old one.A parser that splits a line into tag/value at a given column number.
ParserListener
is an immutable pairing of a parser and listener.Interface for objects that change tag names or properties systematically.Helper class to wrap one TagValueListener inside another one.Implementation of a State in a state machineInterface for a State within this StateMachineclass to represent a State TransitionTable of Transition destination States and their corresponding Tags.Utility class for representing tag-value pairs for TagValueParser implementors.Communication interface between Parser and a TagValueListener that allows listeners to request that a parser/listener pair be pushed onto the stack to handle the current tag.An object that wishes to be informed of events during the parsing of a file.Tokenize single records (lines of text, objects) into a tag and a value.Interface for TagValueListeners that wrap other TagValueListeners -
Classes in org.biojava.bio.program.tagvalue used by org.biojava.bio.program.unigeneClassDescription
ParserListener
is an immutable pairing of a parser and listener.An object that wishes to be informed of events during the parsing of a file.