Uses of Interface
org.biojavax.bio.BioEntryIterator
Packages that use BioEntryIterator
Package
Description
Interactions between biojavax objects and a DB.
Rich implementations of Sequences, Locations and Features.
Classes to support the I/O of RichSequence and
Bioentry objects.
-
Uses of BioEntryIterator in org.biojavax.bio.db
Methods in org.biojavax.bio.db that return BioEntryIteratorModifier and TypeMethodDescriptionAbstractBioEntryDB.getBioEntryIterator()
AbstractRichSequenceDB.getBioEntryIterator()
BioEntryDB.getBioEntryIterator()
Returns a BioEntryIterator over all BioEntrys in the database. -
Uses of BioEntryIterator in org.biojavax.bio.seq
Subinterfaces of BioEntryIterator in org.biojavax.bio.seqModifier and TypeInterfaceDescriptioninterface
Essentially the same as SequenceIterator.Classes in org.biojavax.bio.seq that implement BioEntryIteratorModifier and TypeClassDescriptionstatic final class
Used to iterate over a single rich sequence -
Uses of BioEntryIterator in org.biojavax.bio.seq.io
Classes in org.biojavax.bio.seq.io that implement BioEntryIteratorModifier and TypeClassDescriptionclass
Iterates over a Fasta file that is kept in memory for optimized access.class
Parses a stream into sequences.