Class SystemRegistry

java.lang.Object
org.biojava.directory.SystemRegistry

public class SystemRegistry extends Object

A registry that loads up the standard biodirectory files.

This class will search for the following files in turn:

  1. ~/.bioinformatics/seqdatabase.ini where ~ is the JAVA user home system property
  2. /etc/bioinformatics/seqdatabase.ini
  3. "http://www.open-bio.org/registry/seqdatabase.ini

The default search path may be replaced by an alternative search path specified by the OBDA_SEARCH_PATH system environment variable. This environment variable is a "+" delimted string of files and URLs. The search order proceeds from read left to right.

Author:
Thomas Down, Matthew Pocock, Keith James