Package org.biojava.bio.proteomics
package org.biojava.bio.proteomics
Utilities to aid in performing various physical analysis of proteins.
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ClassesClassDescriptionThis class contains methods for calculating the results of proteolytic digestion of a protein sequence this class is not designed to be thread safeClass that computes isoelectric point for denaturated proteins.
MassCalc
calculates the mass of peptides which for our purposes areSymbolList
s which containSymbol
sfrom the proteinAlphabet
.The protease class stores parameters needed by Digest to digest a protein sequence.Registry and utility methods for Proteases.Simple access to protein seccondary structure assignments.