Package org.biojava.bio.seq.db.emblcd
package org.biojava.bio.seq.db.emblcd
Readers for the EMBL CD-ROM format binary index files used by EMBOSS and Staden packages.
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ClassesClassDescription
AcnumHitReader
reads the "acnum.hit" file of an EMBL CD-ROM format binary index.AcnumTrgReader
reads the "acnum.trg" file of an EMBL CD-ROM format binary index.DivisionLkpReader
reads the "division.lkp" file of an EMBL CD-ROM format binary index.EmblCDROMIndexReader
is an abstract class whose concrete subclasses read EMBL CD-ROM format indices from an underlyingInputStream
.EmblCDROMRandomAccess
is an abstract class whose concrete subclasses can perform fast lookups in EMBL CD-ROM format index files.EntryNamIdxReader
reads the "entrynam.idx" file of an EMBL CD-ROM format binary index.EntryNamRandomAccess
objects provide random access to records within the "entrynam.idx" file of an EMBL CD-ROM format binary index.