Package org.biojava.bio.seq.io.agave
Class AGAVEAltIdsPropHandler
java.lang.Object
org.biojava.bio.seq.io.agave.StAXContentHandlerBase
org.biojava.bio.seq.io.agave.StAXPropertyHandler
org.biojava.bio.seq.io.agave.AGAVEAltIdsPropHandler
- All Implemented Interfaces:
AGAVEDbIdCallbackItf
,StAXContentHandler
Deals with alternate sequence IDs
- Author:
- Hanning Ni Doubletwist Inc
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Field Summary
FieldsFields inherited from class org.biojava.bio.seq.io.agave.StAXPropertyHandler
featureListener, staxenv
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Method Summary
Methods inherited from class org.biojava.bio.seq.io.agave.StAXPropertyHandler
addHandler, endElement, endElementHandler, getHandlerStackIterator, setHandlerCharacteristics, setProperty, startElement, startElementHandler
Methods inherited from class org.biojava.bio.seq.io.agave.StAXContentHandlerBase
characters, endPrefixMapping, endTree, ignorableWhitespace, processingInstruction, setDocumentLocator, skippedEntity, startPrefixMapping, startTree
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Field Details
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AGAVE_ALT_IDS_PROP_HANDLER_FACTORY
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Method Details
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addDbId
- Specified by:
addDbId
in interfaceAGAVEDbIdCallbackItf
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