Package org.biojava.bio.proteomics


package org.biojava.bio.proteomics
Utilities to aid in performing various physical analysis of proteins.
  • Classes
    Class
    Description
    This class contains methods for calculating the results of proteolytic digestion of a protein sequence this class is not designed to be thread safe
    Class that computes isoelectric point for denaturated proteins.
    MassCalc calculates the mass of peptides which for our purposes are SymbolLists which contain Symbolsfrom the protein Alphabet.
    The protease class stores parameters needed by Digest to digest a protein sequence.
    Registry and utility methods for Proteases.
    Simple access to protein seccondary structure assignments.