Uses of Interface
org.biojava.bio.seq.homol.SimilarityPairFeature
Packages that use SimilarityPairFeature
Package
Description
The classes and interfaces for defining sequence similarity and
honology.
Standard in-memory implementations of
Sequence
and
Feature
.-
Uses of SimilarityPairFeature in org.biojava.bio.seq.homol
Fields in org.biojava.bio.seq.homol declared as SimilarityPairFeatureModifier and TypeFieldDescriptionSimilarityPairFeature.Template.sibling
sibling
SimilarityPairFeature
field.Methods in org.biojava.bio.seq.homol that return SimilarityPairFeatureModifier and TypeMethodDescriptionSimilarityPairFeature.getSibling()
getSibling
returns the siblingFeature
, query for subject and vice versa.Methods in org.biojava.bio.seq.homol with parameters of type SimilarityPairFeatureModifier and TypeMethodDescriptionvoid
SimilarityPairFeature.setSibling
(SimilarityPairFeature sibling) setSibling
sets the sibling feature of the pair. -
Uses of SimilarityPairFeature in org.biojava.bio.seq.impl
Classes in org.biojava.bio.seq.impl that implement SimilarityPairFeatureModifier and TypeClassDescriptionclass
SimpleSimilarityPairFeature
represents a similarity between a query sequence and a subject sequence as produced by a search program.Methods in org.biojava.bio.seq.impl that return SimilarityPairFeatureModifier and TypeMethodDescriptionSimpleSimilarityPairFeature.getSibling()
getSibling
returns the sibling feature of the pair.Methods in org.biojava.bio.seq.impl with parameters of type SimilarityPairFeatureModifier and TypeMethodDescriptionvoid
SimpleSimilarityPairFeature.setSibling
(SimilarityPairFeature sibling)