Package org.biojavax.bio.seq.io
Class EMBLxmlFormat.Terms
java.lang.Object
org.biojavax.bio.seq.RichSequence.Terms
org.biojavax.bio.seq.io.EMBLxmlFormat.Terms
- Enclosing class:
EMBLxmlFormat
Implements some EMBLxml-specific terms.
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Field Summary
Fields inherited from class org.biojavax.bio.seq.RichSequence.Terms
DOI_KEY, MEDLINE_KEY, PLASMID_KEY, PUBMED_KEY, SPECIES_KEY, STRAIN_KEY, TISSUE_KEY, TRANSPOSON_KEY
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Constructor Summary
Constructors -
Method Summary
Modifier and TypeMethodDescriptionstatic ComparableTerm
Getter for the Ensembl-specific 'dataClass' termstatic ComparableTerm
Getter for the EMBLxml termstatic ComparableTerm
Getter for the ProjectAccession termstatic ComparableTerm
Getter for the StatusDate termstatic ComparableTerm
Getter for the Status termstatic ComparableTerm
Getter for the SubmitterAccession termstatic ComparableTerm
Getter for the SubmitterVersion termstatic ComparableTerm
Getter for the SubmitterWgsVersion termMethods inherited from class org.biojavax.bio.seq.RichSequence.Terms
getAdditionalAccessionTerm, getCopyrightTerm, getDateAnnotatedTerm, getDateCreatedTerm, getDateUpdatedTerm, getFeatureDescTerm, getFTIdTerm, getGeneNameTerm, getGeneSynonymTerm, getKeywordTerm, getMolTypeTerm, getOrderedLocusNameTerm, getORFNameTerm, getOrganelleTerm, getPlasmidTerm, getRelAnnotatedTerm, getRelCreatedTerm, getRelUpdatedTerm, getSpeciesTerm, getStrainTerm, getStrandedTerm, getTissueTerm, getTransposonTerm
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Constructor Details
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Terms
public Terms()
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Method Details
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getSubmitterAccessionTerm
Getter for the SubmitterAccession term- Returns:
- The SubmitterAccession Term
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getSubmitterVersionTerm
Getter for the SubmitterVersion term- Returns:
- The SubmitterVersion Term
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getSubmitterWgsVersionTerm
Getter for the SubmitterWgsVersion term- Returns:
- The SubmitterWgsVersion Term
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getStatusTerm
Getter for the Status term- Returns:
- The Status Term
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getStatusDateTerm
Getter for the StatusDate term- Returns:
- The StatusDate Term
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getProjectAccessionTerm
Getter for the ProjectAccession term- Returns:
- The ProjectAccession Term
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getEMBLxmlTerm
Getter for the EMBLxml term- Returns:
- The EMBLxml Term
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getDataClassTerm
Getter for the Ensembl-specific 'dataClass' term- Returns:
- The data class Term
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