Package org.biojava.bio.gui.sequence
Class PeptideDigestRenderer
java.lang.Object
org.biojava.utils.AbstractChangeable
org.biojava.bio.gui.sequence.MultiLineRenderer
org.biojava.bio.gui.sequence.AbstractPeptideDigestRenderer
org.biojava.bio.gui.sequence.PeptideDigestRenderer
- All Implemented Interfaces:
Serializable
,SequenceRenderer
,Changeable
A concrete AbstractPeptideDigestRenderer. The features matching the given FeatureFilter
are rendered as blue arrows.
- Since:
- 1.5
- Author:
- Mark Southern
- See Also:
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Nested Class Summary
Nested classes/interfaces inherited from interface org.biojava.bio.gui.sequence.SequenceRenderer
SequenceRenderer.RendererForwarder
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Field Summary
FieldsFields inherited from class org.biojava.bio.gui.sequence.AbstractPeptideDigestRenderer
LANE
Fields inherited from class org.biojava.bio.gui.sequence.MultiLineRenderer
renderers, RENDERERS
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Constructor Summary
ConstructorsConstructorDescriptionPeptideDigestRenderer
(FeatureSource source) PeptideDigestRenderer
(FeatureSource source, FeatureFilter filter) PeptideDigestRenderer
(FeatureSource source, FeatureFilter filter, int distanceBetweenFeatures) -
Method Summary
Methods inherited from class org.biojava.bio.gui.sequence.AbstractPeptideDigestRenderer
doRefreshRenderers, doSortPeptides, getDistanceBetweenFeatures, getFeatureSource, getFilter, setDistanceBetweenFeatures, setFeatureSource, setFilter, sortPeptidesIntoLanes
Methods inherited from class org.biojava.bio.gui.sequence.MultiLineRenderer
_addRenderer, _removeRenderer, addRenderer, clearRenderers, getChangeSupport, getDepth, getMinimumLeader, getMinimumTrailer, paint, processMouseEvent, removeRenderer
Methods inherited from class org.biojava.utils.AbstractChangeable
addChangeListener, addChangeListener, generateChangeSupport, hasListeners, hasListeners, isUnchanging, removeChangeListener, removeChangeListener
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Field Details
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DIGEST
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Constructor Details
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PeptideDigestRenderer
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PeptideDigestRenderer
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PeptideDigestRenderer
public PeptideDigestRenderer(FeatureSource source, FeatureFilter filter, int distanceBetweenFeatures)
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Method Details
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setDefaultPaint
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getDefaultPaint
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createRenderer
- Specified by:
createRenderer
in classAbstractPeptideDigestRenderer
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