Package org.biojavax.bio.phylo.io.nexus
Class DataBlock
java.lang.Object
org.biojavax.bio.phylo.io.nexus.NexusBlock.Abstract
org.biojavax.bio.phylo.io.nexus.CharactersBlock
org.biojavax.bio.phylo.io.nexus.DataBlock
- All Implemented Interfaces:
NexusBlock
,NexusObject
Represents Nexus data blocks.
- Since:
- 1.6
- Author:
- Richard Holland, Tobias Thierer, Jim Balhoff
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Nested Class Summary
Nested classes/interfaces inherited from interface org.biojavax.bio.phylo.io.nexus.NexusBlock
NexusBlock.Abstract
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Field Summary
FieldsModifier and TypeFieldDescriptionstatic final String
A constant representing the name of Data blocks.Fields inherited from class org.biojavax.bio.phylo.io.nexus.CharactersBlock
CHARACTERS_BLOCK
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Constructor Summary
ConstructorsConstructorDescriptionDelegates to NexusBlock.Abstract constructor using DataBlock.DATA_BLOCK as the name. -
Method Summary
Methods inherited from class org.biojavax.bio.phylo.io.nexus.CharactersBlock
addCharLabel, addCharState, addCharStateKeyword, addComment, addEquate, addItem, addMatrixEntry, addState, addStateLabel, addSymbol, addTaxLabel, appendMatrixData, containsCharLabel, containsTaxLabel, getAllCharStates, getCharLabels, getCharStateLabel, getCharStateLabelKeywords, getComments, getDataType, getDimensionsNChar, getDimensionsNTax, getEliminateEnd, getEliminateStart, getEquates, getGap, getItems, getMatchChar, getMatrixData, getMatrixLabels, getMissing, getStateLabels, getStatesFormat, getSymbols, getTaxLabels, isInterleaved, isLabels, isRespectCase, isTokens, isTransposed, removeAllItems, removeAllSymbols, removeCharLabel, removeCharState, removeComment, removeEquate, removeItem, removeState, removeSymbol, removeTaxLabel, setCharStateLabel, setDataType, setDimensionsNChar, setDimensionsNTax, setEliminateEnd, setEliminateStart, setGap, setInterleaved, setLabels, setMatchChar, setMissing, setRespectCase, setStatesFormat, setTokens, setTransposed, writeBlockContents
Methods inherited from class org.biojavax.bio.phylo.io.nexus.NexusBlock.Abstract
getBlockName, writeObject, writeToken
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Field Details
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DATA_BLOCK
A constant representing the name of Data blocks.- See Also:
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Constructor Details
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DataBlock
public DataBlock()Delegates to NexusBlock.Abstract constructor using DataBlock.DATA_BLOCK as the name.
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