Uses of Class
org.biojava.bio.chromatogram.AbstractChromatogram
Packages that use AbstractChromatogram
Package
Description
Interfaces and classes for chromatogram data, as produced by DNA sequencing equipment.
ABI Trace Handling.
Support for the SCF chromatogram format.
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Uses of AbstractChromatogram in org.biojava.bio.chromatogram
Subclasses of AbstractChromatogram in org.biojava.bio.chromatogramModifier and TypeClassDescriptionclass
A basic chromatogram implementation which provides public mutators for setting the various attributes of the chromatogram.Methods in org.biojava.bio.chromatogram that return AbstractChromatogramModifier and TypeMethodDescriptionprotected abstract AbstractChromatogram
AbstractChromatogram.reverseComplementInstance()
Returns a new instance of this AbstractChromatogram subclass for use inreverseComplement()
.protected AbstractChromatogram
SimpleChromatogram.reverseComplementInstance()
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Uses of AbstractChromatogram in org.biojava.bio.program.abi
Subclasses of AbstractChromatogram in org.biojava.bio.program.abiModifier and TypeClassDescriptionclass
An implementation ofChromatogram
to encapulsulate chromatogram data extracted from the files produced by ABI sequencers, such as the the 377 and the 3700.Methods in org.biojava.bio.program.abi that return AbstractChromatogramModifier and TypeMethodDescriptionprotected AbstractChromatogram
ABIFChromatogram.reverseComplementInstance()
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Uses of AbstractChromatogram in org.biojava.bio.program.scf
Subclasses of AbstractChromatogram in org.biojava.bio.program.scfMethods in org.biojava.bio.program.scf that return AbstractChromatogram