Uses of Package
org.biojava.bio.program.blast2html
Packages that use org.biojava.bio.program.blast2html
Package
Description
Code for generating HTML reports from blast output
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Classes in org.biojava.bio.program.blast2html used by org.biojava.bio.program.blast2htmlClassDescriptionAbstract implementation of
AlignmentStyler
, contains utility methods for generating a set of HTML styles from a list of RGB colours.Class to do simple HTML colouring of sequence alignments.Interface for specifying whether a particular pair of residues/bases should be coloured.Takes a database ID and some configuration properties ( such as base URL ) and returns either a URL or a full anchor tag.Renders HTML version of blast-like output.Interface for a factory method to return a list of 0, 1 or moreDatabaseURLGenerator
instances.