Interface OrthoPairSet

All Known Implementing Classes:
AbstractOrthoPairSet, SimpleOrthoPairSet

public interface OrthoPairSet
represents the Homologene Group.
  • Nested Class Summary

    Nested Classes
    Modifier and Type
    Interface
    Description
    static interface 
     
  • Field Summary

    Fields
    Modifier and Type
    Field
    Description
    static final ChangeType
     
  • Method Summary

    Modifier and Type
    Method
    Description
    void
    adds a specified OrthoPair relationship to this group.
    filter an OrthoPairSet
    double
    get the lowest level of identity observed in this Group
    retrieves name of this group.
    get the taxa represented in this group
    returns an iterator to the members of this set
    void
    removes a specified OrthoPair relationship from this group.
    void
    set the name of this group.
    int
    returns an iterator to the contents of the set. /** no. of entries in this Homologene group