Uses of Interface
org.biojava.utils.ChangeListener
Packages that use ChangeListener
Package
Description
The core classes that will be used throughout the bio packages.
Probability distributions over Alphabets.
Graphical displays of biological sequences and associated annotations.
Collections of biological sequence data.
Standard in-memory implementations of
Sequence
and
Feature
.Code for projecting Feature objects and systematically altering their
properties.
Representation of the Symbols that make up a sequence, and locations within
them.
Miscellaneous utility classes used by other BioJava components.
Rich implementations of Sequences, Locations and Features.
GA functions
-
Uses of ChangeListener in org.biojava.bio
Classes in org.biojava.bio that implement ChangeListenerModifier and TypeClassDescriptionstatic class
Deprecated.protected class
Listener used to forward changes for any of the underlying annotations to listeners on this annotation.protected class
Forwards change events from the underlying Annotation to this one. -
Uses of ChangeListener in org.biojava.bio.dist
Classes in org.biojava.bio.dist that implement ChangeListenerModifier and TypeClassDescriptionstatic class
Deprecated.usenew ChangeForwarder.Retyper(this, cs, Annotation.PROPERTY)
instead -
Uses of ChangeListener in org.biojava.bio.gui.sequence
Classes in org.biojava.bio.gui.sequence that implement ChangeListenerModifier and TypeClassDescriptionstatic class
PairwiseRendererForwarder
forward events to other renderers.static class
Methods in org.biojava.bio.gui.sequence with parameters of type ChangeListenerModifier and TypeMethodDescriptionvoid
PairwiseSequencePanel.addChangeListener
(ChangeListener cl) addChangeListener
adds a listener for all types of change.void
PairwiseSequencePanel.addChangeListener
(ChangeListener cl, ChangeType ct) addChangeListener
adds a listener for specific types of change.void
SequencePanel.addChangeListener
(ChangeListener cl) void
SequencePanel.addChangeListener
(ChangeListener cl, ChangeType ct) void
SequencePoster.addChangeListener
(ChangeListener cl) Deprecated.void
SequencePoster.addChangeListener
(ChangeListener cl, ChangeType ct) Deprecated.void
TranslatedSequencePanel.addChangeListener
(ChangeListener cl) addChangeListener
adds a listener for all types of change.void
TranslatedSequencePanel.addChangeListener
(ChangeListener cl, ChangeType ct) addChangeListener
adds a listener for specific types of change.void
PairwiseSequencePanel.removeChangeListener
(ChangeListener cl) removeChangeListener
removes a listener.void
PairwiseSequencePanel.removeChangeListener
(ChangeListener cl, ChangeType ct) removeChangeListener
removes a listener.void
SequencePanel.removeChangeListener
(ChangeListener cl) void
SequencePanel.removeChangeListener
(ChangeListener cl, ChangeType ct) void
SequencePoster.removeChangeListener
(ChangeListener cl) Deprecated.void
SequencePoster.removeChangeListener
(ChangeListener cl, ChangeType ct) Deprecated.void
TranslatedSequencePanel.removeChangeListener
(ChangeListener cl) removeChangeListener
removes a listener.void
TranslatedSequencePanel.removeChangeListener
(ChangeListener cl, ChangeType ct) removeChangeListener
removes a listener. -
Uses of ChangeListener in org.biojava.bio.seq.db
Classes in org.biojava.bio.seq.db that implement ChangeListener -
Uses of ChangeListener in org.biojava.bio.seq.impl
Methods in org.biojava.bio.seq.impl with parameters of type ChangeListenerModifier and TypeMethodDescriptionfinal void
LazyFilterFeatureHolder.addChangeListener
(ChangeListener cl) final void
LazyFilterFeatureHolder.addChangeListener
(ChangeListener cl, ChangeType ct) void
SubSequence.addChangeListener
(ChangeListener cl) void
SubSequence.addChangeListener
(ChangeListener cl, ChangeType ct) final void
LazyFilterFeatureHolder.removeChangeListener
(ChangeListener cl) final void
LazyFilterFeatureHolder.removeChangeListener
(ChangeListener cl, ChangeType ct) void
SubSequence.removeChangeListener
(ChangeListener cl) void
SubSequence.removeChangeListener
(ChangeListener cl, ChangeType ct) -
Uses of ChangeListener in org.biojava.bio.seq.projection
Methods in org.biojava.bio.seq.projection with parameters of type ChangeListenerModifier and TypeMethodDescriptionvoid
ProjectedFeature.addChangeListener
(ChangeListener cl) void
ProjectedFeature.addChangeListener
(ChangeListener cl, ChangeType ct) void
ProjectionContext.addChangeListener
(Feature projFeat, ChangeListener cl, ChangeType ct) Add a ChangeListener to a projected feature.final void
ReparentContext.addChangeListener
(Feature f, ChangeListener cl, ChangeType ct) void
ProjectedFeature.removeChangeListener
(ChangeListener cl) void
ProjectedFeature.removeChangeListener
(ChangeListener cl, ChangeType ct) void
ProjectionContext.removeChangeListener
(Feature projFeat, ChangeListener cl, ChangeType ct) Remove a ChangeListener from a projected feature.final void
ReparentContext.removeChangeListener
(Feature f, ChangeListener cl, ChangeType ct) -
Uses of ChangeListener in org.biojava.bio.symbol
Classes in org.biojava.bio.symbol that implement ChangeListenerModifier and TypeClassDescriptionclass
This adapter screens all edit events to see if they overlap with a window of interest.class
This translates edit events that fall within a window into window co-ordinates.class
Basic implementation of SymbolList. -
Uses of ChangeListener in org.biojava.utils
Classes in org.biojava.utils that implement ChangeListenerModifier and TypeClassDescriptionclass
This is a ChangeListener that ignores everything.class
This is a ChangeListener that is designed to adapt events of one type from one source to events of another type emitted by another source.static class
A ChangeForwarder that systematically uses a given type and wraps the old event.static class
An implementation that always vetoes everything.static class
A listener that remembers the ChangeEvent of the last change.static class
A listener that writes information about the event stream to a PrintStream.Fields in org.biojava.utils declared as ChangeListenerModifier and TypeFieldDescriptionstatic final ChangeListener
ChangeListener.ALWAYS_VETO
Convenience implementation which vetoes every change of which it is notified.static final ChangeListener
ChangeListener.LOG_TO_OUT
Convenience implementation that echoes all events to out.Methods in org.biojava.utils with parameters of type ChangeListenerModifier and TypeMethodDescriptionfinal void
AbstractChangeable.addChangeListener
(ChangeListener cl) final void
AbstractChangeable.addChangeListener
(ChangeListener cl, ChangeType ct) void
Changeable.addChangeListener
(ChangeListener cl) Deprecated.use addChangeListener(cl, ChangeType.UNKNOWN)void
Changeable.addChangeListener
(ChangeListener cl, ChangeType ct) Add a listener that will be informed of changes of a given type.void
ChangeSupport.addChangeListener
(ChangeListener cl) Add a listener that will be informed of all changes.void
ChangeSupport.addChangeListener
(ChangeListener cl, ChangeType ct) Add a listener that will be informed of changes of a given type (and it's subtypes)final void
Unchangeable.addChangeListener
(ChangeListener cl) final void
Unchangeable.addChangeListener
(ChangeListener cl, ChangeType ct) void
ChangeHub.addListener
(Object key, ChangeListener listener, ChangeType ct) add a ChangeListener associated with given key.void
IndexedChangeHub.addListener
(Object key, ChangeListener listener, ChangeType ct) final void
AbstractChangeable.removeChangeListener
(ChangeListener cl) final void
AbstractChangeable.removeChangeListener
(ChangeListener cl, ChangeType ct) void
Changeable.removeChangeListener
(ChangeListener cl) Deprecated.use removeChangeListener(cl, ChangeType.UNKNOWN)void
Changeable.removeChangeListener
(ChangeListener cl, ChangeType ct) Remove a listener that was interested in a specific types of changes.void
ChangeSupport.removeChangeListener
(ChangeListener cl) Remove a listener that was interested in all types of changes.void
ChangeSupport.removeChangeListener
(ChangeListener cl, ChangeType ct) Remove a listener that was interested in a specific types of changes.final void
Unchangeable.removeChangeListener
(ChangeListener cl) final void
Unchangeable.removeChangeListener
(ChangeListener cl, ChangeType ct) void
ChangeHub.removeListener
(Object key, ChangeListener listener, ChangeType ct) remove a ChangeListener associated with given key.void
IndexedChangeHub.removeListener
(Object key, ChangeListener listener, ChangeType ct) -
Uses of ChangeListener in org.biojavax.bio.seq
Methods in org.biojavax.bio.seq with parameters of type ChangeListenerModifier and TypeMethodDescriptionvoid
InfinitelyAmbiguousSymbolList.addChangeListener
(ChangeListener cl) Add a listener that will be informed of all changes.void
InfinitelyAmbiguousSymbolList.addChangeListener
(ChangeListener cl, ChangeType ct) Add a listener that will be informed of changes of a given type.void
InfinitelyAmbiguousSymbolList.removeChangeListener
(ChangeListener cl) Remove a listener that was interested in all types of changes.void
InfinitelyAmbiguousSymbolList.removeChangeListener
(ChangeListener cl, ChangeType ct) Remove a listener that was interested in a specific types of changes. -
Uses of ChangeListener in org.biojavax.ga.functions
Methods in org.biojavax.ga.functions with parameters of type ChangeListenerModifier and TypeMethodDescriptionvoid
CrossOverFunction.NoCross.addChangeListener
(ChangeListener cl) void
CrossOverFunction.NoCross.addChangeListener
(ChangeListener cl, ChangeType ct) void
MutationFunction.NoMutation.addChangeListener
(ChangeListener cl) void
MutationFunction.NoMutation.addChangeListener
(ChangeListener cl, ChangeType ct) void
CrossOverFunction.NoCross.removeChangeListener
(ChangeListener c) void
CrossOverFunction.NoCross.removeChangeListener
(ChangeListener cl, ChangeType ct) void
MutationFunction.NoMutation.removeChangeListener
(ChangeListener c) void
MutationFunction.NoMutation.removeChangeListener
(ChangeListener cl, ChangeType ct)
new ChangeForwarder.Retyper(source, cs, Annotation.PROPERTY)
instead