Package org.biojava.bio.seq.io
Class ReferenceAnnotation
java.lang.Object
org.biojava.utils.AbstractChangeable
org.biojava.bio.AbstractAnnotation
org.biojava.bio.seq.io.ReferenceAnnotation
- All Implemented Interfaces:
Serializable
,Annotation
,Changeable
Deprecated.
Use org.biojavax.bio.seq.io framework instead
- Since:
- 1.3.1
- Author:
- Lorna Morris
- See Also:
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Field Summary
Fields inherited from interface org.biojava.bio.Annotation
EMPTY_ANNOTATION, PROPERTY
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Constructor Summary
Constructors -
Method Summary
Modifier and TypeMethodDescriptionprotected Map
Deprecated.Implement this to return the Map delegate.protected boolean
Deprecated.A convenience method to see if we have allocated the properties Map.Methods inherited from class org.biojava.bio.AbstractAnnotation
asMap, containsProperty, equals, getProperty, hashCode, keys, removeProperty, setProperty, toString
Methods inherited from class org.biojava.utils.AbstractChangeable
addChangeListener, addChangeListener, generateChangeSupport, getChangeSupport, hasListeners, hasListeners, isUnchanging, removeChangeListener, removeChangeListener
Methods inherited from class java.lang.Object
clone, finalize, getClass, notify, notifyAll, wait, wait, wait
Methods inherited from interface org.biojava.utils.Changeable
addChangeListener, addChangeListener, isUnchanging, removeChangeListener, removeChangeListener
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Constructor Details
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ReferenceAnnotation
public ReferenceAnnotation()Deprecated.
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Method Details
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getProperties
Deprecated.Description copied from class:AbstractAnnotation
Implement this to return the Map delegate. Modifying this return value will modify the properties associated with this annotation. From code in the 1.2 version of AbstractAnnotation This is required for the implementation of an Annotation that extends AbstractAnnotation. Where possible implementations should be backed with aLinkedHashMap
or similar so properties are iterated in the order they were added.- Specified by:
getProperties
in classAbstractAnnotation
- Returns:
- a Map containing all properties
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propertiesAllocated
Deprecated.Description copied from class:AbstractAnnotation
A convenience method to see if we have allocated the properties Map. This is required for the implementation of an Annotation that extends AbstractAnnotation.- Specified by:
propertiesAllocated
in classAbstractAnnotation
- Returns:
- true if the properties have been allocated, false otherwise
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