Uses of Interface
org.biojava.bio.seq.db.IDMaker
Packages that use IDMaker
Package
Description
Collections of biological sequence data.
Interactions between biojavax objects and a DB.
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Uses of IDMaker in org.biojava.bio.seq.db
Classes in org.biojava.bio.seq.db that implement IDMakerFields in org.biojava.bio.seq.db declared as IDMakerModifier and TypeFieldDescriptionstatic final IDMaker
IDMaker.byName
A simple implementation of IDMaker that hashes by sequence name.static final IDMaker
IDMaker.byURN
A simple implementation of IDMaker that hashes by URN.Methods in org.biojava.bio.seq.db that return IDMakerModifier and TypeMethodDescriptionHashSequenceDB.getIDMaker()
Retrieve the IDMaker associated with this database.Constructors in org.biojava.bio.seq.db with parameters of type IDMakerModifierConstructorDescriptionHashSequenceDB
(IDMaker idMaker) Generate a HashSequenceDB object that will use idMaker to generate ids for sequences and have a null name.HashSequenceDB
(IDMaker idMaker, String name) Generate a HashSequenceDB object that will use idMaker to generate ids for sequences and have the requested name.IndexedSequenceDB
(IDMaker idMaker, IndexStore indexStore) Create an IndexedSequenceDB by specifying both the IDMaker and IndexStore used. -
Uses of IDMaker in org.biojavax.bio.db
Methods in org.biojavax.bio.db that return IDMakerModifier and TypeMethodDescriptionHashRichSequenceDB.getIDMaker()
Retrieve the IDMaker associated with this database.Constructors in org.biojavax.bio.db with parameters of type IDMakerModifierConstructorDescriptionHashRichSequenceDB
(IDMaker idMaker) Generate a HashRichSequenceDB object that will use idMaker to generate ids for sequences and have a null name.HashRichSequenceDB
(IDMaker idMaker, String name) Generate a HashRichSequenceDB object that will use idMaker to generate ids for sequences and have the requested name.