Uses of Interface
org.biojava.bio.symbol.SymbolListFactory
Packages that use SymbolListFactory
Package
Description
Classes and interfaces for processing and producing flat-file representations
of sequences.
Representation of the Symbols that make up a sequence, and locations within
them.
Classes to support the I/O of RichSequence and
Bioentry objects.
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Uses of SymbolListFactory in org.biojava.bio.seq.io
Constructors in org.biojava.bio.seq.io with parameters of type SymbolListFactoryModifierConstructorDescriptionChunkedSymbolListFactory
(SymbolListFactory symListFactory) ChunkedSymbolListFactory
(SymbolListFactory userSymListFactory, int threshold) -
Uses of SymbolListFactory in org.biojava.bio.symbol
Classes in org.biojava.bio.symbol that implement SymbolListFactoryModifier and TypeClassDescriptionclass
This class makes PackedSymbolLists.class
This class makes SimpleSymbolLists. -
Uses of SymbolListFactory in org.biojavax.bio.seq.io
Constructors in org.biojavax.bio.seq.io with parameters of type SymbolListFactoryModifierConstructorDescriptionCreates a new instance of SimpleRichSequenceBuilder with the desired symbollistfactory and threshold of zero.SimpleRichSequenceBuilder
(SymbolListFactory factory, int threshold) Creates a new instance of SimpleRichSequenceBuilder with the desired symbollistfactory and threshold.Creates a new instance of SimpleRichSequenceBuilderFactorySimpleRichSequenceBuilderFactory
(SymbolListFactory fact, int threshold) Creates a new instance of SimpleRichSequenceBuilderFactory that uses a specified factory forSymbolLists
longer than a specified length.