Uses of Interface
org.biojava.bio.program.homologene.Taxon
Packages that use Taxon
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Uses of Taxon in org.biojava.bio.program.homologene
Classes in org.biojava.bio.program.homologene that implement TaxonFields in org.biojava.bio.program.homologene declared as TaxonModifier and TypeFieldDescriptionstatic final Taxon
Taxon.A_THALIANA
static final Taxon
Taxon.B_TAURUS
static final Taxon
Taxon.C_ELEGANS
static final Taxon
Taxon.D_MELANOGASTER
static final Taxon
Taxon.D_RERIO
static final Taxon
Taxon.H_SAPIENS
static final Taxon
Taxon.H_VULGARE
static final Taxon
Taxon.L_ESCULENTUM
static final Taxon
Taxon.M_MUSCULUS
static final Taxon
Taxon.M_TRUNCULATA
static final Taxon
Taxon.O_SATIVA
static final Taxon
Taxon.R_NORVEGICUS
static final Taxon
Taxon.S_SCROFA
static final Taxon
Taxon.T_AESTIVUM
static final Taxon
Taxon.X_LAEVIS
static final Taxon
Taxon.Z_MAYS
Methods in org.biojava.bio.program.homologene that return TaxonModifier and TypeMethodDescriptionstatic Taxon
HomologeneTools.createTaxon
(int taxonID, String description) add a Taxonstatic Taxon
HomologeneTools.getTaxon
(int taxonID) get the Taxon corresponding to this Taxon IDOrthologue.getTaxon()
return the Taxon associated with this orthologueSimpleOrthologue.getTaxon()
Methods in org.biojava.bio.program.homologene with parameters of type TaxonModifier and TypeMethodDescriptionHomologeneDB.createOrthologue
(Taxon taxon, String locusID, String homologeneID, String accession) Create an orthologue.SimpleHomologeneDB.createOrthologue
(Taxon taxon, String locusID, String homologeneID, String accession) Constructors in org.biojava.bio.program.homologene with parameters of type Taxon