Uses of Class
org.biojava.bio.dp.BackPointer
Packages that use BackPointer
Package
Description
HMM and Dynamic Programming Algorithms.
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Uses of BackPointer in org.biojava.bio.dp
Fields in org.biojava.bio.dp declared as BackPointerModifier and TypeFieldDescriptionfinal BackPointer
BackPointer.back
The previous backpointer (towards origin of DP matrix) in traceback.Constructors in org.biojava.bio.dp with parameters of type BackPointer -
Uses of BackPointer in org.biojava.bio.dp.twohead
Fields in org.biojava.bio.dp.twohead declared as BackPointerModifier and TypeFieldDescriptionCell.backPointers
protected BackPointer[][][]
AbstractMatrixPairDPCursor.bPointers
protected BackPointer[][][]
LightPairDPCursor.bPointers
Description of the Fieldprotected BackPointer[]
AbstractMatrixPairDPCursor.emptyBP
protected BackPointer[]
LightPairDPCursor.emptyBP
Description of the FieldMethods in org.biojava.bio.dp.twohead with parameters of type BackPointerModifier and TypeMethodDescriptionCellCalculatorFactory.viterbi
(ScoreType scoreType, BackPointer terminal) DPInterpreter.viterbi
(ScoreType scoreType, BackPointer terminal)