Package org.biojava.bio.program.gff
Class GFFRecordFilter.SequenceFilter
java.lang.Object
org.biojava.bio.program.gff.GFFRecordFilter.SequenceFilter
- All Implemented Interfaces:
GFFRecordFilter
- Enclosing interface:
GFFRecordFilter
Implementation of GFFRecordFilter that accepts
records based upon the sequence name.
- Author:
- Matthew Pocock
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Nested Class Summary
Nested classes/interfaces inherited from interface org.biojava.bio.program.gff.GFFRecordFilter
GFFRecordFilter.AcceptAll, GFFRecordFilter.FeatureFilter, GFFRecordFilter.FrameFilter, GFFRecordFilter.NotFilter, GFFRecordFilter.SequenceFilter, GFFRecordFilter.SourceFilter, GFFRecordFilter.StrandFilter
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Field Summary
Fields inherited from interface org.biojava.bio.program.gff.GFFRecordFilter
ACCEPT_ALL
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Constructor Summary
Constructors -
Method Summary
Modifier and TypeMethodDescriptionboolean
Return whether or not to accept record.Retrieve the current sequence name.void
setSeqName
(String seqName) Set the sequence name to seqName.
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Constructor Details
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SequenceFilter
public SequenceFilter() -
SequenceFilter
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Method Details
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getSeqName
Retrieve the current sequence name.- Returns:
- the sequence name String
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setSeqName
Set the sequence name to seqName.- Parameters:
seqName
- the new sequence name to match
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accept
Description copied from interface:GFFRecordFilter
Return whether or not to accept record.- Specified by:
accept
in interfaceGFFRecordFilter
- Parameters:
record
- the GFFRecord to filter- Returns:
- record.
getSeqName
()
==
this.getSeqName()
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