Uses of Interface
org.biojava.bio.symbol.ReversibleTranslationTable
Packages that use ReversibleTranslationTable
Package
Description
Probability distributions over Alphabets.
Classes and interfaces for defining biological sequences and informatics
objects.
Representation of the Symbols that make up a sequence, and locations within
them.
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Uses of ReversibleTranslationTable in org.biojava.bio.dist
Methods in org.biojava.bio.dist that return ReversibleTranslationTableModifier and TypeMethodDescriptionTranslatedDistribution.getTable()
Retrieve the translation table encapsulating the map from this emission spectrum to the underlying one.Constructors in org.biojava.bio.dist with parameters of type ReversibleTranslationTableModifierConstructorDescriptionTranslatedDistribution
(ReversibleTranslationTable table, Distribution other, DistributionFactory distFact) Create a new TranslatedDistribution. -
Uses of ReversibleTranslationTable in org.biojava.bio.seq
Methods in org.biojava.bio.seq that return ReversibleTranslationTableModifier and TypeMethodDescriptionstatic ReversibleTranslationTable
DNATools.complementTable()
Get a translation table for complementing DNA symbols.static ReversibleTranslationTable
NucleotideTools.complementTable()
Get a translation table for complementing Nucleotide symbols.static ReversibleTranslationTable
RNATools.complementTable()
Get a translation table for complementing DNA symbols.static ReversibleTranslationTable
RNATools.transcriptionTable()
Get a translation table for converting DNA to RNA. -
Uses of ReversibleTranslationTable in org.biojava.bio.symbol
Classes in org.biojava.bio.symbol that implement ReversibleTranslationTableModifier and TypeClassDescriptionclass
an abstract class implementing basic functionality of a translation table that translates Symbols from one Alphabet to another.class
A no-frills implementation of TranslationTable that uses a Map to map from symbols in a finite source alphabet into a target alphabet.