Package org.biojavax.bio.seq.io
Class UniProtFormat.Terms
java.lang.Object
org.biojavax.bio.seq.RichSequence.Terms
org.biojavax.bio.seq.io.UniProtFormat.Terms
- Enclosing class:
UniProtFormat
Implements some UniProt-specific terms.
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Field Summary
Fields inherited from class org.biojavax.bio.seq.RichSequence.Terms
DOI_KEY, MEDLINE_KEY, PLASMID_KEY, PUBMED_KEY, SPECIES_KEY, STRAIN_KEY, TISSUE_KEY, TRANSPOSON_KEY
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Constructor Summary
Constructors -
Method Summary
Modifier and TypeMethodDescriptionstatic ComparableTerm
Getter for the protein exists termstatic ComparableTerm
Getter for the UniProt combined database termstatic ComparableTerm
Getter for the UniProt termMethods inherited from class org.biojavax.bio.seq.RichSequence.Terms
getAdditionalAccessionTerm, getCopyrightTerm, getDataClassTerm, getDateAnnotatedTerm, getDateCreatedTerm, getDateUpdatedTerm, getFeatureDescTerm, getFTIdTerm, getGeneNameTerm, getGeneSynonymTerm, getKeywordTerm, getMolTypeTerm, getOrderedLocusNameTerm, getORFNameTerm, getOrganelleTerm, getPlasmidTerm, getRelAnnotatedTerm, getRelCreatedTerm, getRelUpdatedTerm, getSpeciesTerm, getStrainTerm, getStrandedTerm, getTissueTerm, getTransposonTerm
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Constructor Details
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Terms
public Terms()
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Method Details
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getUniProtTerm
Getter for the UniProt term- Returns:
- The UniProt Term
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getUniProtDBNameTerm
Getter for the UniProt combined database term- Returns:
- The combined database for UniProt Term
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getProteinExistsTerm
Getter for the protein exists term- Returns:
- The protein exists Term
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