Uses of Interface
org.biojavax.bio.seq.PositionResolver
Packages that use PositionResolver
Package
Description
The Biojava extensions packages, classes that extend the core biojava
functionality
Rich implementations of Sequences, Locations and Features.
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Uses of PositionResolver in org.biojavax
Methods in org.biojavax that return PositionResolverModifier and TypeMethodDescriptionstatic PositionResolver
RichObjectFactory.getDefaultPositionResolver()
Returns the default position resolver object.Methods in org.biojavax with parameters of type PositionResolverModifier and TypeMethodDescriptionstatic void
RichObjectFactory.setDefaultPositionResolver
(PositionResolver pr) Sets the default position resolver to use when creating new rich feature locations. -
Uses of PositionResolver in org.biojavax.bio.seq
Classes in org.biojavax.bio.seq that implement PositionResolverModifier and TypeClassDescriptionstatic class
The minimal resolver returns the base which provides the average range, halfway between maximal and minimal.static class
The maximal resolver returns the base which provides the largest possible range.static class
The minimal resolver returns the base which provides the smallest possible range.Methods in org.biojavax.bio.seq with parameters of type PositionResolverModifier and TypeMethodDescriptionvoid
EmptyRichLocation.setPositionResolver
(PositionResolver p) Sets the resolver to use when working out actual base coordinates from fuzzy positions.void
RichLocation.setPositionResolver
(PositionResolver p) Sets the resolver to use when working out actual base coordinates from fuzzy positions.void
SimpleRichLocation.setPositionResolver
(PositionResolver p) Sets the resolver to use when working out actual base coordinates from fuzzy positions.