Uses of Interface
org.biojava.bio.program.gff3.GFF3DocumentHandler
Packages that use GFF3DocumentHandler
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Uses of GFF3DocumentHandler in org.biojava.bio.program.gff3
Methods in org.biojava.bio.program.gff3 with parameters of type GFF3DocumentHandlerModifier and TypeMethodDescriptionprotected GFF3Record
GFF3Parser.createRecord
(GFF3DocumentHandler handler, List aList, String rest, String comment, Ontology ontology, Ontology fallBack) Actually turns a list of tokens, some value string and a comment into a GFF3Record and informs handler.void
GFF3Parser.parse
(BufferedReader bReader, GFF3DocumentHandler handler, Ontology ontology) Informs handler of each line of gff read from bReader.void
GFF3Parser.parse
(BufferedReader bReader, GFF3DocumentHandler handler, Ontology ontology, String locator) Informs handler of each line of GFF read from bReader