Uses of Interface
org.biojava.bio.seq.db.SequenceDB

Packages that use SequenceDB
Package
Description
Classes to generate and describe sequence alignments.
HMM and Dynamic Programming Algorithms.
Graphical interfaces for biojava objects.
GFF manipulation.
Parser for Phred output
SSAHA sequence searching API.
Creation of objects from SAX events using the BioJava BlastLikeDataSetCollection DTD.
Objects for representing Unigene clusters.
Interfaces and classes for representing sequence similarity search results.
Collections of biological sequence data.
General purpose Sequence storage in a relational database.
Sequences and SequenceDBs which are composed from data taken from a number of data sources.
Standard in-memory implementations of Sequence and Feature.
Classes and interfaces for processing and producing flat-file representations of sequences.
Interactions between biojavax objects and a DB.
Interface between biojava and biosql databases
Interfaces to NCBI data.