Uses of Package
org.biojava.bio.dp.twohead
Packages that use org.biojava.bio.dp.twohead
Package
Description
HMM and Dynamic Programming Algorithms.
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Classes in org.biojava.bio.dp.twohead used by org.biojava.bio.dpClassDescriptionThe interface for all functions that can calculate the 'scores' array for a given cell.
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Classes in org.biojava.bio.dp.twohead used by org.biojava.bio.dp.twoheadClassDescriptionA single cell in the DP matrix.The interface for all functions that can calculate the 'scores' array for a given cell.The interface for all functions that can calculate the 'scores' array for a given cell.Cache for columns of emission probabilities in pair-wise alignment algorithms.A cursor over a DP matrix.Storage structure for intermediate values from a pairwise dynamic programming run.