Uses of Package
org.biojava.bio.seq.io.agave
Packages that use org.biojava.bio.seq.io.agave
Package
Description
Classes for converting between AGAVE XML and BioJava objects.
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Classes in org.biojava.bio.seq.io.agave used by org.biojava.bio.seq.io.agaveClassDescriptionThis interface defines mapping from BioJava into AGAVE format.An interface that can be tested for by nested handlers when trying to do a callback.An interface that can be tested for by nested handlers when trying to do a callback.An interface that can be tested for by nested handlers when trying to do a callback.An interface that can be tested for by nested handlers when trying to do a callback.this is the interface implemented by several classesAn interface that can be tested for by nested handlers when trying to do a callback.match_regionImplements indenting for elements.xrefxrefsInterface which exposes delegation services offered by a StAX event source.This class is copied to agave package Simple interface for filtering SAX/StAX startElement eventsmark interfaceBasic implementation of AGAVEAnnotFilterInterface for StAX content handlers.Simple implementation of the
StAXContentHandler
interface, with empty implementations for all the methods.StAX handler shamelessly ripped off from Thomas Down's XFFFeatureSetHandler.Factory for StAX content handlers.StAX handler shamelessly ripped off from Thomas Down's XFFFeatureSetHandler.