Package org.biojava.bio.seq.distributed


package org.biojava.bio.seq.distributed
Sequences and SequenceDBs which are composed from data taken from a number of data sources.

This package attempts to generalize the data aggregation facilities offered by DAS clients (e.g. the org.biojava.bio.program.das package), and generalize them, allowing data from non-DAS sources to be integrated.

NOTE: all APIs in this package are currently at an experimental stage, and may change from day to day!

  • Class
    Description
    Object which contributes data to a DistributedSequenceDB.
    Sequence database from the meta-DAS system.
    Use a GFFEntrySet as a DataSource for adding annotation to sequences.
    Turn an entire SequenceDB instance into a DistDataSource.