Uses of Enum Class
org.biojava.nbio.alignment.Alignments.PairwiseSequenceScorerType
Packages that use Alignments.PairwiseSequenceScorerType
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Uses of Alignments.PairwiseSequenceScorerType in org.biojava.nbio.alignment
Methods in org.biojava.nbio.alignment that return Alignments.PairwiseSequenceScorerTypeModifier and TypeMethodDescriptionReturns the enum constant of this class with the specified name.Alignments.PairwiseSequenceScorerType.values()
Returns an array containing the constants of this enum class, in the order they are declared.Methods in org.biojava.nbio.alignment with parameters of type Alignments.PairwiseSequenceScorerTypeModifier and TypeMethodDescriptionstatic <S extends Sequence<C>,
C extends Compound>
List<PairwiseSequenceScorer<S, C>> Alignments.getAllPairsScorers
(List<S> sequences, Alignments.PairwiseSequenceScorerType type, GapPenalty gapPenalty, SubstitutionMatrix<C> subMatrix) Alignments.getAllPairsScores
(List<S> sequences, Alignments.PairwiseSequenceScorerType type, GapPenalty gapPenalty, SubstitutionMatrix<C> subMatrix)