Uses of Package
jebl.evolution.sequences
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Packages that use jebl.evolution.sequences Package Description jebl.evolution.align Provides classes and interfaces for pairwise alignment of two sequences.jebl.evolution.aligners jebl.evolution.alignments jebl.evolution.io jebl.evolution.parsimony jebl.evolution.sequences jebl.evolution.substmodel -
Classes in jebl.evolution.sequences used by jebl.evolution.align Class Description Sequence A biomolecular sequence. -
Classes in jebl.evolution.sequences used by jebl.evolution.aligners Class Description Sequence A biomolecular sequence. -
Classes in jebl.evolution.sequences used by jebl.evolution.alignments Class Description Sequence A biomolecular sequence.Sequences A set of sequence objects.SequenceType Interface for sequences data types.State -
Classes in jebl.evolution.sequences used by jebl.evolution.io Class Description Sequence A biomolecular sequence.SequenceType Interface for sequences data types. -
Classes in jebl.evolution.sequences used by jebl.evolution.parsimony Class Description State -
Classes in jebl.evolution.sequences used by jebl.evolution.sequences Class Description AminoAcidState CodonState As of 2007-07-30, instances of this class are only constructed for non-ambigous nucleotide triplets - seeCodons
.FilteredSequence GeneticCode A set of standard genetic codes.NucleotideState Sequence A biomolecular sequence.SequenceType Interface for sequences data types.State StateClassification -
Classes in jebl.evolution.sequences used by jebl.evolution.substmodel Class Description SequenceType Interface for sequences data types.