Class Hierarchy
- java.lang.Object
- jebl.evolution.trees.AbstractRootedTree (implements jebl.evolution.trees.RootedTree)
- jebl.evolution.trees.FilteredRootedTree
- jebl.evolution.trees.SortedRootedTree
- jebl.evolution.trees.TransformedRootedTree
- jebl.evolution.trees.MutableRootedTree
- jebl.evolution.trees.ReRootedTree
- jebl.evolution.trees.RootedFromUnrooted
- jebl.evolution.trees.RootedSubtree
- jebl.evolution.trees.FilteredRootedTree
- jebl.evolution.trees.BaseEdge (implements jebl.evolution.graphs.Edge)
- jebl.evolution.trees.BaseNode (implements jebl.evolution.graphs.Node)
- jebl.evolution.trees.CalculateSplitRates
- jebl.evolution.trees.CladeSystem
- jebl.evolution.trees.AttributedCladeSystem
- jebl.evolution.trees.ClusteringTreeBuilder<T> (implements jebl.evolution.trees.TreeBuilder<T>)
- jebl.evolution.trees.NeighborJoiningTreeBuilder
- jebl.evolution.trees.CompactRootedTree (implements jebl.evolution.trees.RootedTree)
- jebl.evolution.trees.ConsensusTreeBuilder<T> (implements jebl.evolution.trees.TreeBuilder<T>)
- jebl.evolution.trees.MostProbableTopology
- jebl.evolution.trees.RootedTreeUtils
- jebl.evolution.trees.SimpleRootedTree (implements jebl.evolution.trees.RootedTree)
- jebl.evolution.trees.SimpleTree (implements jebl.evolution.trees.Tree)
- jebl.evolution.trees.SplitSystem
- jebl.evolution.trees.SplitUtils
- jebl.evolution.trees.TreeBiPartitionInfo
- jebl.evolution.trees.TreeBuilderFactory
- jebl.evolution.trees.TreeChangeEvent
- jebl.evolution.trees.TreeChangeListener
- jebl.evolution.trees.TreeSelectionChangeEvent
- jebl.evolution.trees.Utils
- jebl.evolution.trees.AbstractRootedTree (implements jebl.evolution.trees.RootedTree)
Interface Hierarchy
- jebl.util.Attributable
- jebl.evolution.graphs.Graph
- jebl.evolution.trees.Tree
- jebl.evolution.trees.RootedTree
- jebl.evolution.trees.Tree
- jebl.evolution.graphs.Graph
- jebl.evolution.trees.TreeBuilder<T>
Enum Hierarchy
- java.lang.Object
- java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
- jebl.evolution.trees.ConsensusTreeBuilder.Method
- jebl.evolution.trees.SortedRootedTree.BranchOrdering
- jebl.evolution.trees.TransformedRootedTree.Transform
- jebl.evolution.trees.TreeBiPartitionInfo.DistanceNorm
- jebl.evolution.trees.TreeBuilderFactory.ConsensusMethod
- jebl.evolution.trees.TreeBuilderFactory.DistanceModel
- jebl.evolution.trees.TreeBuilderFactory.Method
- java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)