Class CollectRawWgsMetrics.RawWgsMetrics

java.lang.Object
htsjdk.samtools.metrics.MetricBase
picard.analysis.MergeableMetricBase
picard.analysis.WgsMetrics
picard.analysis.CollectRawWgsMetrics.RawWgsMetrics
Enclosing class:
CollectRawWgsMetrics

@DocumentedFeature(groupName="Metrics", summary="Metrics") public static class CollectRawWgsMetrics.RawWgsMetrics extends WgsMetrics
  • Constructor Details

    • RawWgsMetrics

      public RawWgsMetrics()
    • RawWgsMetrics

      public RawWgsMetrics(htsjdk.samtools.util.IntervalList intervals, htsjdk.samtools.util.Histogram<Integer> highQualityDepthHistogram, htsjdk.samtools.util.Histogram<Integer> unfilteredDepthHistogram, double pctExcludedByAdapter, double pctExcludedByMapq, double pctExcludedByDupes, double pctExcludedByPairing, double pctExcludedByBaseq, double pctExcludedByOverlap, double pctExcludedByCapping, double pctTotal, int coverageCap, htsjdk.samtools.util.Histogram<Integer> unfilteredBaseQHistogram, int sampleSize)