Package picard.illumina.parser
Enum Class ReadType
- All Implemented Interfaces:
Serializable
,Comparable<ReadType>
,Constable
A read type describes a stretch of cycles in an ReadStructure
(e.g. Assume we have a paired end/barcoded run with the 76 template cycles followed by 8 barcode cycles followed by
another 76 template reads, the run would be represented by the ReadStructure 76T8B76T)
Note: Currently SKIP is unused by IlluminaBasecallsToSam, ExtractIlluminaBarcodes, and IlluminaDataProvider
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Nested Class Summary
Nested classes/interfaces inherited from class java.lang.Enum
Enum.EnumDesc<E extends Enum<E>>
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Enum Constant Summary
Enum Constants -
Field Summary
Fields -
Method Summary
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Enum Constant Details
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T
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B
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M
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S
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Field Details
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Template
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Barcode
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MolecularIndex
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Skip
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Method Details
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values
Returns an array containing the constants of this enum class, in the order they are declared.- Returns:
- an array containing the constants of this enum class, in the order they are declared
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valueOf
Returns the enum constant of this class with the specified name. The string must match exactly an identifier used to declare an enum constant in this class. (Extraneous whitespace characters are not permitted.)- Parameters:
name
- the name of the enum constant to be returned.- Returns:
- the enum constant with the specified name
- Throws:
IllegalArgumentException
- if this enum class has no constant with the specified nameNullPointerException
- if the argument is null
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