Class BarcodeExtractor

java.lang.Object
picard.illumina.BarcodeExtractor

public class BarcodeExtractor extends Object
BarcodeExtractor is used to match barcodes and collect barcode match metrics.
  • Constructor Details

  • Method Details

    • getMetrics

      public Map<String,BarcodeMetric> getMetrics()
    • getNoMatchMetric

      public BarcodeMetric getNoMatchMetric()
    • getMinimumBaseQuality

      public int getMinimumBaseQuality()
    • generateNoMatchBarcode

      public static String[] generateNoMatchBarcode(ReadStructure inputReadStructure)