Class RawRGBToDicomMultiFrame

java.lang.Object
com.pixelmed.convert.RawRGBToDicomMultiFrame

public class RawRGBToDicomMultiFrame extends Object

A class for converting raw RGB color single frame image input format files (such as from Visible Human) into one or more DICOM multi-frame secondary capture images.

  • Constructor Details

    • RawRGBToDicomMultiFrame

      public RawRGBToDicomMultiFrame(String formatFileName, String inputFolderName, String inputFileNameSuffix, String outputFolderName, String patientName, String patientID, String studyID, String seriesNumber) throws IOException, DicomException

      Read raw RGB color single frame image input format files (such as from Visible Human) into one or more DICOM multi-frame secondary capture images.

      Will obtain the description of the geometry of the raw RGB files, e.g., a Visible Human README file, from the specified format description file.

      The order of the frames is assumed to be by their lexicographically sorted file name (hence numeric file names need to be the same length, e.g., zero-padded.

      Parameters:
      formatFileName -
      inputFolderName -
      inputFileNameSuffix -
      outputFolderName -
      patientName -
      patientID -
      studyID -
      seriesNumber -
      Throws:
      IOException
      DicomException
  • Method Details

    • generateGeometryFunctionalGroupsFromRawRGBInformation

      public static AttributeList generateGeometryFunctionalGroupsFromRawRGBInformation(RawRGBInformation rawRGBInfo, AttributeList list, int numberOfFrames) throws DicomException

      Read a per-frame and shared functional group sequences for the geometry defined in a raw image file description.

      Parameters:
      rawRGBInfo - description of the size of the raw image
      list - an existing (possibly empty) attribute list, if null, a new one will be created; may already shared and per-frame functional group sequences or they will be added
      numberOfFrames - return attribute list with per-frame and shared functional group sequences for geometry added
      Throws:
      DicomException
    • generateDICOMPixelDataModuleAttributesFromRawRGBFiles

      public static AttributeList generateDICOMPixelDataModuleAttributesFromRawRGBFiles(String[] inputFileNames, String inputFileNameSuffix, RawRGBInformation rawRGBInfo, AttributeList list) throws IOException, DicomException

      Create DICOM Pixel Data Module attributes.

      Parameters:
      inputFileNames - the single frame raw RGB format image files sorted in the correct order
      inputFileNameSuffix - so we can tell whether or not the input files are compressed
      rawRGBInfo - description of the size of the raw image already read from the inputFile
      list - an existing (possibly empty) attribute list, if null, a new one will be created; may already include "better" image pixel module attributes to use return attribute list with Image Pixel Module (including Pixel Data) and other attributes added
      Throws:
      IOException
      DicomException
    • getSortedInputFileNames

      protected static String[] getSortedInputFileNames(String inputFolderName, String inputFileNameSuffix) throws IOException
      Throws:
      IOException
    • main

      public static void main(String[] arg)

      Read raw RGB color single frame image input format files (such as from Visible Human) into one or more DICOM multi-frame secondary capture images.

      Will obtain the description of the geometry of the raw RGB files, e.g., a Visible Human README file, from the specified format description file.

      Parameters:
      arg - eight parameters, the format description file, inputFolder, inputFileNameSuffix, outputFolder, patientName, patientID, studyID, seriesNumber