Uses of Package
org.snpeff.fileIterator
Packages that use org.snpeff.fileIterator
Package
Description
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Classes in org.snpeff.fileIterator used by org.snpeff
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Classes in org.snpeff.fileIterator used by org.snpeff.fileIteratorClassDescriptionReads all sequences from a file Warning: You should always call "close()" at the end of the iteration.Opens a file and iterates over all objects
in the file Note: The file is not loaded in memory, thus allows to iterate over very large files Iterate on each line.Iterate on each line in this fileOpens a Marker file and iterates over all markersOpens a regulation file and create Regulation elements.Opens a sequence change file and iterates over all sequence changes -
Classes in org.snpeff.fileIterator used by org.snpeff.fileIterator.microCosmClassDescriptionOpens a file and iterates over all objects
in the file Note: The file is not loaded in memory, thus allows to iterate over very large files Iterate on each line. -
Classes in org.snpeff.fileIterator used by org.snpeff.genBank
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Classes in org.snpeff.fileIterator used by org.snpeff.pedClassDescriptionOpens a file and iterates over all objects
in the file Note: The file is not loaded in memory, thus allows to iterate over very large files -
Classes in org.snpeff.fileIterator used by org.snpeff.snpEffect
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Classes in org.snpeff.fileIterator used by org.snpeff.snpEffect.commandLine
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Classes in org.snpeff.fileIterator used by org.snpeff.vcf