Package org.snpeff.binseq.comparator
Class SequenceReference
java.lang.Object
org.snpeff.binseq.comparator.SequenceReference
A reference to a sequence. It's composed by a sequence index and a start position (both are integres stored in a long)
- Author:
- pcingola
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Constructor Summary
Constructors -
Method Summary
Modifier and TypeMethodDescriptionstatic long
getReference
(int sequenceIdx, int start) static int
getSeqIdx
(long ref) static int
getStart
(long ref)
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Constructor Details
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SequenceReference
public SequenceReference()
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Method Details
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getReference
public static long getReference(int sequenceIdx, int start) -
getSeqIdx
public static int getSeqIdx(long ref) -
getStart
public static int getStart(long ref)
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