Class Utr3prime

All Implemented Interfaces:
Serializable, Cloneable, Comparable<Interval>, TxtSerializable

public class Utr3prime extends Utr
Interval for a UTR (5 prime UTR and 3 prime UTR
Author:
pcingola
See Also:
  • Constructor Details

    • Utr3prime

      public Utr3prime()
    • Utr3prime

      public Utr3prime(Exon parent, int start, int end, boolean strandMinus, String id)
  • Method Details

    • isUtr3prime

      public boolean isUtr3prime()
      Specified by:
      isUtr3prime in class Utr
    • isUtr5prime

      public boolean isUtr5prime()
      Specified by:
      isUtr5prime in class Utr
    • variantEffect

      public boolean variantEffect(Variant variant, VariantEffects variantEffects)
      Description copied from class: Marker
      Calculate the effect of this variant
      Overrides:
      variantEffect in class Marker