Package org.snpeff.stats
Class AlleleCountStats
java.lang.Object
org.snpeff.stats.AlleleCountStats
- All Implemented Interfaces:
SamplingStats<VcfEntry>
Count singletons and other allele counts per sample
- Author:
- pablocingolani
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Field Summary
Fields -
Constructor Summary
Constructors -
Method Summary
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Field Details
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MAX_MAC
public static final int MAX_MAC- See Also:
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Constructor Details
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AlleleCountStats
public AlleleCountStats()
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Method Details
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hasData
public boolean hasData()Description copied from interface:SamplingStats
Does this statistic have any data?- Specified by:
hasData
in interfaceSamplingStats<VcfEntry>
- Returns:
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sample
Update MAC counters- Specified by:
sample
in interfaceSamplingStats<VcfEntry>
- Parameters:
vcfEntry
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toString
Show results to stdout
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