Uses of Package
org.snpsift.annotate
Packages that use org.snpsift.annotate
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Classes in org.snpsift.annotate used by org.snpsift
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Classes in org.snpsift.annotate used by org.snpsift.annotateClassDescriptionAnnotate using a VCF "database"Use a file as a 'marker' database.Use a VCF file as a database for annotations A VCF database consists of a VCF file and an index.Represents a marker in a file (located at 'fileIdx' bytes since the beginning of the file)A database query and a result.Represents a set of VCF entries stored in an (uncompressed) file All entries belong to the same chromosomeInterval tree structure for an 'VcfIndexChromo' The whole tree is stored in a single class as a set of arrays.
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Classes in org.snpsift.annotate used by org.snpsift.fileIterator