public class TestCasesFilterChrPos
extends Object
Test cases for SnpSift filterChrPos
- Author:
- pcingola
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Field Summary
Fields
static boolean
static boolean
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Constructor Summary
Constructors
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Method Summary
void
List<org.snpeff.vcf.VcfEntry>
void
void
void
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
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Field Details
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debug
public static boolean debug
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verbose
public static boolean verbose
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Constructor Details
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TestCasesFilterChrPos
public TestCasesFilterChrPos()
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Method Details
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filter
public void filter(String dbFileName,
String fileName,
int expectedCount)
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filter
public List<org.snpeff.vcf.VcfEntry> filter(String chrPosFileName,
String vcfFileName,
String[] extraArgs,
int expectedCount)
Filter
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test_01
public void test_01()
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test_02
public void test_02()
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test_03
public void test_03()