Hierarchy For Package org.snpsift
Class Hierarchy
- java.lang.Object
- org.snpsift.SnpSift (implements org.snpeff.snpEffect.commandLine.CommandLine, org.snpeff.snpEffect.VcfAnnotator)
- org.snpsift.SnpSiftCmdAlleleMatrix
- org.snpsift.SnpSiftCmdAnnotate
- org.snpsift.SnpSiftCmdCaseControl
- org.snpsift.SnpSiftCmdConcordance
- org.snpsift.SnpSiftCmdCovarianceMatrix
- org.snpsift.SnpSiftCmdDbNsfp
- org.snpsift.SnpSiftCmdExtractFields
- org.snpsift.SnpSiftCmdFilter
- org.snpsift.SnpSiftCmdFilterChrPos
- org.snpsift.SnpSiftCmdFilterGt
- org.snpsift.SnpSiftCmdGeneSets
- org.snpsift.SnpSiftCmdGt
- org.snpsift.SnpSiftCmdGwasCatalog
- org.snpsift.SnpSiftCmdIntersect
- org.snpsift.SnpSiftCmdIntervals
- org.snpsift.SnpSiftCmdIntervalsIndex
- org.snpsift.SnpSiftCmdJoin
- org.snpsift.SnpSiftCmdPedShow
- org.snpsift.SnpSiftCmdPhastCons
- org.snpsift.SnpSiftCmdPrivate
- org.snpsift.SnpSiftCmdRemoveReferenceGenotypes
- org.snpsift.SnpSiftCmdRmInfo
- org.snpsift.SnpSiftCmdSort
- org.snpsift.SnpSiftCmdSplit
- org.snpsift.SnpSiftCmdTsTv
- org.snpsift.SnpSiftCmdVarType
- org.snpsift.SnpSiftCmdVcf2Tped
- org.snpsift.SnpSiftCmdVcfCheck
- org.snpsift.SnpSiftCmdVcfOperator
- org.snpsift.VcfLd
- org.snpsift.SnpSift (implements org.snpeff.snpEffect.commandLine.CommandLine, org.snpeff.snpEffect.VcfAnnotator)
Enum Class Hierarchy
- java.lang.Object
- java.lang.Enum<E> (implements java.lang.Comparable<T>, java.lang.constant.Constable, java.io.Serializable)
- org.snpsift.SnpSiftCmdVcf2Tped.UseMissing
- org.snpsift.SnpSiftCmdVcfOperator.Operator
- java.lang.Enum<E> (implements java.lang.Comparable<T>, java.lang.constant.Constable, java.io.Serializable)