Class FieldLof

Direct Known Subclasses:
FieldNmd

public class FieldLof extends FieldSub
A LOF field form SnpEff: E.g.: 'LOF[2].GENE'
Author:
pablocingolani
  • Constructor Details

  • Method Details

    • getFieldString

      public String getFieldString(org.snpeff.vcf.VcfEntry vcfEntry)
      Get a field from VcfEntry
      Overrides:
      getFieldString in class FieldSub
    • getName

      public String getName()
      Overrides:
      getName in class Field
    • getReturnType

      public org.snpeff.vcf.VcfInfoType getReturnType(org.snpeff.vcf.VcfEntry vcfEntry)
    • init

      protected void init()
    • toString

      public String toString()
      Overrides:
      toString in class FieldSub