#include "seq.h"
#include "symmatrix.h"
#include "progress.h"
Go to the source code of this file.
◆ KTuplePairDist()
void KTuplePairDist |
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symmatrix_t * |
tmat, |
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mseq_t * |
mseq, |
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int |
istart, |
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int |
iend, |
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int |
jstart, |
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int |
jend, |
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ktuple_param_t * |
param_override, |
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progress_t * |
prProgress, |
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unsigned long int * |
ulStepNo, |
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unsigned long int |
ulTotalStepNo |
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) |
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extern |
Will compute ktuple scores and store in tmat Following values will be set: tmat[i][j], where istart <= i <iend and jstart <= j < jend i.e. zero-offset tmat data members have to be preallocated
if ktuple_param_t *aln_param == NULL defaults will be used