libfreecontact 1.0.21
Loading...
Searching...
No Matches
freecontact::predictor Member List

This is the complete list of members for freecontact::predictor, including all inherited members.

cont_res_t typedeffreecontact::predictor
dbgfreecontact::predictor
freq_t typedeffreecontact::predictor
freq_vec_t typedeffreecontact::predictor
get_seq_weights(freq_vec_t &__aliw, double &__wtot, const ali_t &__ali, double __clustpc, bool __veczw=true, int __num_threads=0)freecontact::predictor
pairfreq_t typedeffreecontact::predictor
predictor(bool __dbg=false)freecontact::predictorinline
run(const ali_t &__ali, const freq_vec_t &__aliw, const double __wtot, double __density, double __gapth, uint16_t __mincontsep, double __pseudocnt, double __pscnt_weight, bool __estimate_ivcov, double __shrink_lambda, bool __cov20, bool __apply_gapth, double __rho, int __num_threads=0, time_t __icme_timeout=1800, time_res_t *__timing=NULL)freecontact::predictor
run(const ali_t &__ali, double __clustpc, double __density, double __gapth, uint16_t __mincontsep, double __pseudocnt, double __pscnt_weight, bool __estimate_ivcov, double __shrink_lambda, bool __cov20, bool __apply_gapth, double __rho, bool __veczw=true, int __num_threads=0, time_t __icme_timeout=1800, time_res_t *__timing=NULL)freecontact::predictor
run(const ali_t &__ali, const parset_t &__parset, bool __veczw=true, int __num_threads=0, time_t __icme_timeout=1800, time_res_t *__timing=NULL)freecontact::predictorinline
time_res_t typedeffreecontact::predictor
~predictor()freecontact::predictorinlinevirtual