Class FilteringIterator
- java.lang.Object
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- htsjdk.variant.variantcontext.filter.FilteringVariantContextIterator
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- htsjdk.variant.variantcontext.filter.FilteringIterator
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- All Implemented Interfaces:
CloseableIterator<VariantContext>
,Closeable
,AutoCloseable
,Iterable<VariantContext>
,Iterator<VariantContext>
@Deprecated public class FilteringIterator extends FilteringVariantContextIterator
Deprecated.since 2/29/16 useFilteringVariantContextIterator
insteadA filtering iterator for VariantContexts that takes a base iterator and a VariantContextFilter. The iterator returns all the variantcontexts for which the filter's function "test" returns true (and only those)
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Constructor Summary
Constructors Constructor Description FilteringIterator(Iterator<VariantContext> iterator, VariantContextFilter filter)
Deprecated.
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Method Summary
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Methods inherited from class htsjdk.variant.variantcontext.filter.FilteringVariantContextIterator
close, hasNext, iterator, next, remove
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Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
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Methods inherited from interface htsjdk.samtools.util.CloseableIterator
stream, toList
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Methods inherited from interface java.lang.Iterable
forEach, spliterator
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Methods inherited from interface java.util.Iterator
forEachRemaining
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Constructor Detail
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FilteringIterator
public FilteringIterator(Iterator<VariantContext> iterator, VariantContextFilter filter)
Deprecated.
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