Class VCFFilterHeaderLine

    • Constructor Detail

      • VCFFilterHeaderLine

        public VCFFilterHeaderLine​(String name,
                                   String description)
        create a VCF filter header line
        Parameters:
        name - the name for this header line
        description - the description for this header line
      • VCFFilterHeaderLine

        public VCFFilterHeaderLine​(String name)
        Convenience constructor for FILTER whose description is the name
        Parameters:
        name -
      • VCFFilterHeaderLine

        public VCFFilterHeaderLine​(String line,
                                   VCFHeaderVersion version)
        create a VCF info header line
        Parameters:
        line - the header line
        version - the vcf header version
    • Method Detail

      • shouldBeAddedToDictionary

        public boolean shouldBeAddedToDictionary()
        Description copied from class: VCFHeaderLine
        By default the header lines won't be added to the dictionary, unless this method will be override (for example in FORMAT, INFO or FILTER header lines)
        Overrides:
        shouldBeAddedToDictionary in class VCFHeaderLine
        Returns:
        false
      • getDescription

        public String getDescription()
        get the "Description" field
        Returns:
        the "Description" field