Node |
ReRootedTree.createNodes(RootedTree tree,
Node parent,
Node child) |
Clones the entire tree structure from the given (unrooted) Tree.
|
Node |
SimpleRootedTree.createNodes(Tree tree,
Node parent,
Node child) |
Clones the entire tree structure from the given (unrooted) Tree.
|
Edge |
CompactRootedTree.getEdge(Node node1,
Node node2) |
|
Edge |
FilteredRootedTree.getEdge(Node node1,
Node node2) |
|
Edge |
MutableRootedTree.getEdge(Node node1,
Node node2) |
Returns the Edge that connects these two nodes
|
Edge |
ReRootedTree.getEdge(Node node1,
Node node2) |
Returns the Edge that connects these two nodes
|
Edge |
RootedFromUnrooted.getEdge(Node node1,
Node node2) |
|
Edge |
RootedSubtree.getEdge(Node node1,
Node node2) |
Returns the Edge that connects these two nodes
|
Edge |
SimpleRootedTree.getEdge(Node node1,
Node node2) |
Returns the Edge that connects these two nodes
|
Edge |
SimpleTree.getEdge(Node node1,
Node node2) |
Returns the Edge that connects these two nodes
|
double |
CompactRootedTree.getEdgeLength(Node node1,
Node node2) |
|
double |
FilteredRootedTree.getEdgeLength(Node node1,
Node node2) |
|
double |
MutableRootedTree.getEdgeLength(Node node1,
Node node2) |
|
double |
ReRootedTree.getEdgeLength(Node node1,
Node node2) |
|
double |
RootedFromUnrooted.getEdgeLength(Node node1,
Node node2) |
|
double |
RootedSubtree.getEdgeLength(Node node1,
Node node2) |
|
double |
SimpleRootedTree.getEdgeLength(Node node1,
Node node2) |
|
double |
SimpleTree.getEdgeLength(Node node1,
Node node2) |
|