Uses of Class
jebl.evolution.align.Align
-
Packages that use Align Package Description jebl.evolution.align Provides classes and interfaces for pairwise alignment of two sequences. -
-
Uses of Align in jebl.evolution.align
Subclasses of Align in jebl.evolution.align Modifier and Type Class Description class
MaximalSegmentPair
class
NeedlemanWunsch
class
NeedlemanWunschAffine
class
NeedlemanWunschLinearSpace
class
NeedlemanWunschLinearSpaceAffine
class
NonOverlapMultipleLocalAffine
Performs recursive local alignments.class
OldNeedlemanWunschAffine
class
OverlapAlign
class
SmithWaterman
class
SmithWatermanLinearSpace
class
SmithWatermanLinearSpaceAffine
Methods in jebl.evolution.align with parameters of type Align Modifier and Type Method Description void
SequenceShuffler. shuffle(Align algorithm, java.lang.String sq1, java.lang.String sq2, int numShuffles)
-