Class SequenceAlignmentsDistanceMatrix

  • All Implemented Interfaces:
    DistanceMatrix

    public class SequenceAlignmentsDistanceMatrix
    extends BasicDistanceMatrix
    Builds a distance matrix by performing a series of pairwise alignments between the specified sequences (unlike the methods in jebl.evolution.distances, which extract the pairwise distances from a multiple sequence alignment).
    Version:
    $Id: SequenceAlignmentsDistanceMatrix.java 1057 2010-05-24 03:20:46Z matt_kearse $
    Author:
    Joseph Heled