Package org.jmol.shapespecial
Class Dots
java.lang.Object
org.jmol.shape.Shape
org.jmol.shape.AtomShape
org.jmol.shapespecial.Dots
- Direct Known Subclasses:
GeoSurface
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Field Summary
FieldsModifier and TypeFieldDescriptionprivate javajs.util.BS
(package private) javajs.util.BS
private javajs.util.BS
boolean
static int
(package private) RadiusData
(package private) static final float
(package private) int
(package private) int
(package private) float
Fields inherited from class org.jmol.shape.AtomShape
bsSizeDefault, colixes, isActive, isSet, mad, mads, monomerCount, paletteIDs
Fields inherited from class org.jmol.shape.Shape
bsColixSet, bsSizeSet, isBioShape, ms, myType, RADIUS_MAX, shapeID, translucentAllowed, translucentLevel, vf, vwr
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Constructor Summary
Constructors -
Method Summary
Modifier and TypeMethodDescriptionint
getSize
(int atomIndex) overridden in Dots, CGOMesh, and AtomShape(package private) void
void
void
void
setProperty
(String propertyName, Object value, javajs.util.BS bs) protected void
setSizeRD
(RadiusData rd, javajs.util.BS bsSelected) Methods inherited from class org.jmol.shape.AtomShape
checkColixLength, getInfoAsString, initModelSet, setColixAndPalette, setPropAS, setSize, setSize2, setSizeRD2
Methods inherited from class org.jmol.shape.Shape
appendCmd, checkBoundsMinMax, checkObjectClicked, checkObjectDragged, checkObjectHovered, coordinateInRange, encodeColor, findNearestAtomIndex, getColix, getColixA, getColixB, getColixI, getColorCommand, getColorCommandUnk, getFontCommand, getIndexFromName, getProperty, getPropertyData, getPropShape, getShapeDetail, getSizeG, getTranslucentLabel, initializeShape, replaceGroup, setModelSet, setModelVisibilityFlags, setPropS, setShapeSizeRD, wasClicked
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Field Details
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ec
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isSurface
public boolean isSurface -
SURFACE_DISTANCE_FOR_CALCULATION
static final float SURFACE_DISTANCE_FOR_CALCULATION- See Also:
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bsOn
javajs.util.BS bsOn -
bsSelected
private javajs.util.BS bsSelected -
bsIgnore
private javajs.util.BS bsIgnore -
MAX_LEVEL
public static int MAX_LEVEL -
thisAtom
int thisAtom -
thisRadius
float thisRadius -
thisArgb
int thisArgb -
rdLast
RadiusData rdLast
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Constructor Details
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Dots
public Dots()
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Method Details
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initShape
public void initShape() -
getSize
public int getSize(int atomIndex) Description copied from class:Shape
overridden in Dots, CGOMesh, and AtomShape -
setProperty
- Specified by:
setProperty
in classShape
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initialize
void initialize() -
setSizeRD
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setAtomClickability
public void setAtomClickability()- Overrides:
setAtomClickability
in classAtomShape
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getShapeState
- Overrides:
getShapeState
in classAtomShape
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