Class SerialCoalescentSimulator

java.lang.Object
pal.coalescent.SerialCoalescentSimulator
All Implemented Interfaces:
Serializable

public class SerialCoalescentSimulator extends Object implements Serializable
Simulates a set of coalescent intervals given a demographic model.
Version:
$Id: SerialCoalescentSimulator.java,v 1.3 2002/10/03 06:06:55 matt Exp $
Author:
Alexei Drummond
See Also:
  • Constructor Details

    • SerialCoalescentSimulator

      public SerialCoalescentSimulator()
  • Method Details

    • simulateIntervals

      public CoalescentIntervals simulateIntervals(TimeOrderCharacterData tocd, DemographicModel model, boolean createTree)
      Simulates a set of CoalescentIntervals from a genealogy.
      Parameters:
      tocd - the time order character data determining the order and time in which samples are added.
      model - the demographic model to use
    • getTree

      public Tree getTree()