Uses of Package
pal.distance
Packages that use pal.distance
Package
Description
Classes for reading and generating distance matrices, including computation
of pairwise distances for sequence data (maximum-likelihood and observed
distances).
Classes for evaluating evolutionary hypothesis (chi-square and likelihood
criteria) and estimating model parameters.
Classes for providing the data structure of
trees, for constructing and modifying trees, and for parameterizing
trees (e.g., clock constraint).
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Classes in pal.distance used by pal.distanceClassDescriptionstorage for pairwise distance matrices.exception thrown by ReadDistanceMatrix
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Classes in pal.distance used by pal.eval
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Classes in pal.distance used by pal.supgmaClassDescriptionstorage for pairwise distance matrices.
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Classes in pal.distance used by pal.tree