libpappsomspp
Library for mass spectrometry
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xicpeptidefragmention.cpp
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1
2/*******************************************************************************
3 * Copyright (c) 2015 Olivier Langella <Olivier.Langella@moulon.inra.fr>.
4 *
5 * This file is part of the PAPPSOms++ library.
6 *
7 * PAPPSOms++ is free software: you can redistribute it and/or modify
8 * it under the terms of the GNU General Public License as published by
9 * the Free Software Foundation, either version 3 of the License, or
10 * (at your option) any later version.
11 *
12 * PAPPSOms++ is distributed in the hope that it will be useful,
13 * but WITHOUT ANY WARRANTY; without even the implied warranty of
14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
15 * GNU General Public License for more details.
16 *
17 * You should have received a copy of the GNU General Public License
18 * along with PAPPSOms++. If not, see <http://www.gnu.org/licenses/>.
19 *
20 * Contributors:
21 * Olivier Langella <Olivier.Langella@moulon.inra.fr> - initial API and
22 *implementation
23 ******************************************************************************/
24
25
27namespace pappso
28{
30 const MsRunId &msrun_id,
31 const PeptideFragmentIonSp &peptideFragmentIonSp,
32 unsigned int z,
33 PrecisionPtr precision)
34 : XicPeptideInterface(msrun_id, peptideFragmentIonSp, precision, z),
35 msp_peptideFragmentIon(peptideFragmentIonSp)
36{
37}
38
42
44 : XicPeptideInterface(other),
45 msp_peptideFragmentIon(other.msp_peptideFragmentIon)
46{
47}
48
49} // namespace pappso
MS run identity MsRunId identifies an MS run with a unique ID (XmlId) and contains eventually informa...
Definition msrunid.h:54
XicPeptideFragmentIon(const MsRunId &msrun_id, const PeptideFragmentIonSp &peptideFragmentIonSp, unsigned int z, PrecisionPtr precision)
tries to keep as much as possible monoisotopes, removing any possible C13 peaks and changes multichar...
Definition aa.cpp:39
std::shared_ptr< const PeptideFragmentIon > PeptideFragmentIonSp