ProteoWizard
SpectrumList_PrecursorRecalculator.hpp
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1//
2// $Id$
3//
4//
5// Original author: Darren Kessner <darren@proteowizard.org>
6//
7// Copyright 2008 Spielberg Family Center for Applied Proteomics
8// Cedars-Sinai Medical Center, Los Angeles, California 90048
9//
10// Licensed under the Apache License, Version 2.0 (the "License");
11// you may not use this file except in compliance with the License.
12// You may obtain a copy of the License at
13//
14// http://www.apache.org/licenses/LICENSE-2.0
15//
16// Unless required by applicable law or agreed to in writing, software
17// distributed under the License is distributed on an "AS IS" BASIS,
18// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
19// See the License for the specific language governing permissions and
20// limitations under the License.
21//
22
23
24#ifndef _SPECTRUMLIST_PRECURSORRECALCULATOR_HPP_
25#define _SPECTRUMLIST_PRECURSORRECALCULATOR_HPP_
26
27
30
31
32namespace pwiz {
33namespace analysis {
34
35
36/// SpectrumList wrapper that recalculates precursor info on spectrum() requests
38{
39 public:
40
41 /// constructor needs the full MSData object for instrument info;
42 /// SpectrumList_PrecursorRecalculator holds a reference to the original SpectrumListPtr
44
45 /// \name SpectrumList interface
46 //@{
47 virtual msdata::SpectrumPtr spectrum(size_t index, bool getBinaryData = false) const;
48 //@}
49
50 private:
51 struct Impl;
52 boost::shared_ptr<Impl> impl_;
55};
56
57
58} // namespace analysis
59} // namespace pwiz
60
61
62#endif // _SPECTRUMLIST_PRECURSORRECALCULATOR_HPP_
63
#define PWIZ_API_DECL
Definition Export.hpp:32
SpectrumList wrapper that recalculates precursor info on spectrum() requests.
SpectrumList_PrecursorRecalculator & operator=(SpectrumList_PrecursorRecalculator &)
SpectrumList_PrecursorRecalculator(const msdata::MSData &msd)
constructor needs the full MSData object for instrument info; SpectrumList_PrecursorRecalculator hold...
virtual msdata::SpectrumPtr spectrum(size_t index, bool getBinaryData=false) const
retrieve a spectrum by index
SpectrumList_PrecursorRecalculator(SpectrumList_PrecursorRecalculator &)
Inheritable pass-through implementation for wrapping a SpectrumList.
boost::shared_ptr< Spectrum > SpectrumPtr
Definition MSData.hpp:573
This is the root element of ProteoWizard; it represents the mzML element, defined as: intended to cap...
Definition MSData.hpp:850