Here is a list of all variables with links to the classes they belong to:
- p -
- pages : pwiz::identdata::BibliographicReference
- param : Root
- param2 : Second
- param3 : Second
- parameters : pwiz::data::peakdata::Software, pwiz::data::pepxml::SearchSummary
- paramGroupPtrs : pwiz::data::ParamContainer, pwiz::msdata::MSData
- params : pwiz::analysis::MS2Deisotoper, pwiz::analysis::MS2NoiseFilter, pwiz::analysis::PrecursorMassFilter
- params_ : pwiz::analysis::MSXDemultiplexer, pwiz::analysis::OverlapDemultiplexer
- parent : pwiz::identdata::Organization
- parent_file : pwiz::data::pepxml::DataFilter
- parentIndex : isotopeChain
- parentsAfter : TestChargeStateCalculator
- parentsAfter_ : pwiz::analysis::SpectrumList_ChargeFromIsotope
- parentsBefore : TestChargeStateCalculator
- parentsBefore_ : pwiz::analysis::SpectrumList_ChargeFromIsotope
- parentsIsA : pwiz::cv::CVTermInfo, pwiz::data::Term
- parentsPartOf : pwiz::cv::CVTermInfo, pwiz::data::Term
- parentTolerance : pwiz::identdata::SpectrumIdentificationProtocol
- parseCharacters : pwiz::minimxml::SAXParser::Handler
- partialDiffOK : pwiz::data::BaseDiffConfig
- passThreshold : pwiz::identdata::ProteinDetectionHypothesis, pwiz::identdata::SpectrumIdentificationItem
- pastMaxIndex : SelectedIndexPredicate
- path : pwiz::identdata::CVMap
- pathmask : TestPathmask
- pathnameArray : TestPathmask
- pattern : pwiz::identdata::RegexCVMap
- peak : pwiz::analysis::RegionAnalyzer::SpectrumStats, pwiz::data::peakdata::HandlerPeak
- peakarea_ : ralab::base::ms::PeakPicker< TReal, TIntegrator >
- peakCount : pwiz::frequency::PeakDetectorMatchedFilter::Score
- peakel : pwiz::data::peakdata::HandlerPeakel
- peakelGrower_ : pwiz::analysis::FeatureDetectorPeakel
- peakelGrower_Proximity : pwiz::analysis::FeatureDetectorPeakel::Config
- peakelPicker_ : pwiz::analysis::FeatureDetectorPeakel
- peakelPicker_Basic : pwiz::analysis::FeatureDetectorPeakel::Config
- peakels : pwiz::data::peakdata::Feature
- peakExtractor_ : pwiz::analysis::FeatureDetectorPeakel
- peakFamilies : pwiz::data::peakdata::Scan
- peakFamilyDetector : pwiz::analysis::PrecursorRecalculatorDefault::Config
- peakFinder_ : pwiz::analysis::PeakExtractor
- peakFinder_SNR : pwiz::analysis::FeatureDetectorPeakel::Config
- peakFitter_ : pwiz::analysis::PeakExtractor
- peakFitter_Parabola : pwiz::analysis::FeatureDetectorPeakel::Config
- peakmass_ : ralab::base::ms::PeakPicker< TReal, TIntegrator >
- peakMaxCorrelationAngle : pwiz::frequency::PeakDetectorMatchedFilter::Config
- peakPicking : pwiz::util::ReaderTestConfig
- peaks : pwiz::data::peakdata::Peakel, pwiz::data::peakdata::PeakFamily, pwiz::frequency::PeakDetectorMatchedFilter::Score, pwiz::util::MSIHandler::Record
- peaksCount : pwiz::msdata::SpectrumIdentityFromMzXML
- peakThresholdFactor : pwiz::frequency::PeakDetectorMatchedFilter::Config
- peptide : pwiz::analysis::PepxmlRecordReader::record, pwiz::data::pepxml::SearchHit
- peptideEvidence : pwiz::identdata::SequenceCollection
- peptideEvidencePtr : pwiz::identdata::PeptideHypothesis, pwiz::identdata::SpectrumIdentificationItem
- peptideHypothesis : pwiz::identdata::ProteinDetectionHypothesis
- peptideNextAA : pwiz::data::pepxml::SearchHit
- peptidePrevAA : pwiz::data::pepxml::SearchHit
- peptideprophet_summary : pwiz::data::pepxml::AnalysisSummary
- peptideProphetResult : pwiz::data::pepxml::AnalysisResult
- peptidePtr : pwiz::identdata::PeptideEvidence, pwiz::identdata::SpectrumIdentificationItem, pwiz::tradata::Target, pwiz::tradata::Transition
- peptidePtrs : pwiz::tradata::TraData
- peptides : pwiz::identdata::SequenceCollection
- peptideSequence : pwiz::identdata::Peptide
- peptideTerminus : pwiz::data::pepxml::AminoAcidModification
- pepxmlfile : pwiz::analysis::PepxmlRecordReader::Config
- pimpl : pwiz::identdata::DelimReader, pwiz::identdata::MascotReader, pwiz::identdata::Pep2MzIdent, pwiz::peptideid::PeptideID::Iterator, pwiz::peptideid::PeptideID_flat, pwiz::peptideid::PeptideID_pepXml, pwiz::util::DefaultTabHandler, pwiz::util::MSIHandler, pwiz::util::TabReader
- pmc_ : pwiz::analysis::MSXDemultiplexer, pwiz::analysis::OverlapDemultiplexer
- poisson : pwiz::analysis::MS2Deisotoper::Config
- polarity : pwiz::analysis::SpectrumList_FilterPredicate_Polarity
- polynomialOrder : TestData
- position : pwiz::data::pepxml::ModAminoAcidMass
- possible_charges : TestSpectrumInfo
- post : pwiz::identdata::PeptideEvidence
- ppm_ : ralab::base::resample::PPMCompFunctor< TReal >
- pre : pwiz::identdata::PeptideEvidence
- precision : pwiz::analysis::SpectrumBinaryData::Config, pwiz::data::BaseDiffConfig, pwiz::msdata::BinaryDataEncoder::Config
- precisionOverrides : pwiz::msdata::BinaryDataEncoder::Config
- precursor : pwiz::msdata::Chromatogram, pwiz::tradata::Target, pwiz::tradata::Transition
- precursor_ion_charge : pwiz::data::pepxml::MixtureModel
- precursor_mz : TestSpectrumInfo
- precursorCharge : TestMS2Denoise
- precursorList : pwiz::analysis::SpectrumList_ScanSummer
- precursorMap : pwiz::analysis::SpectrumList_ScanSummer
- precursorMass : TestMS2Denoise
- precursorMassType : pwiz::data::pepxml::SearchSummary
- precursorMZs : precursorGroup
- precursorMzSet_ : pwiz::analysis::SpectrumList_FilterPredicate_PrecursorMzSet
- precursorNeutralMass : pwiz::data::pepxml::SpectrumQuery
- precursors : pwiz::msdata::Spectrum, pwiz::msdata::SpectrumInfo
- precursorsPerSpectrum_ : pwiz::analysis::PrecursorMaskCodec
- precursorTol_ : pwiz::analysis::SpectrumList_ScanSummer
- prediction : pwiz::tradata::Transition
- preferOnlyMsLevel : pwiz::msdata::Reader::Config
- prefix : pwiz::data::Term
- prefixes : pwiz::data::OBO
- preprocessWithLogarithm : pwiz::analysis::PeakFinder_SNR::Config
- prior_probability : pwiz::data::pepxml::MixtureModel
- probability : pwiz::data::pepxml::PeptideProphetResult
- problem_ : ralab::base::ms::SimplePicker< TReal >
- processingMethod_ : pwiz::analysis::PrecursorMaskCodec
- processingMethods : pwiz::msdata::DataProcessing
- product : pwiz::msdata::Chromatogram, pwiz::tradata::Transition
- products : pwiz::msdata::Spectrum
- propertyValues : pwiz::cv::CVTermInfo, pwiz::data::Term
- protein : pwiz::analysis::PepxmlRecordReader::record, pwiz::data::pepxml::AlternativeProtein, pwiz::data::pepxml::SearchHit
- protein_descr : pwiz::peptideid::PeptideID::Record
- proteinAmbiguityGroup : pwiz::identdata::ProteinDetectionList
- proteinDescr : pwiz::data::pepxml::AlternativeProtein, pwiz::data::pepxml::SearchHit
- proteinDetection : pwiz::identdata::AnalysisCollection
- proteinDetectionHypothesis : pwiz::identdata::ProteinAmbiguityGroup
- proteinDetectionListPtr : pwiz::identdata::AnalysisData, pwiz::identdata::ProteinDetection
- proteinDetectionProtocol : pwiz::identdata::AnalysisProtocolCollection
- proteinDetectionProtocolPtr : pwiz::identdata::ProteinDetection
- proteinListPtr : pwiz::proteome::ProteomeData
- proteinPtrs : pwiz::tradata::Peptide, pwiz::tradata::TraData
- proteins : pwiz::proteome::ProteinListSimple
- provider : pwiz::identdata::IdentData
- publication : pwiz::identdata::BibliographicReference
- publications : pwiz::tradata::TraData
- publisher : pwiz::identdata::BibliographicReference