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Hierarchy For All Packages
Package Hierarchies:
neobio.alignment
,
neobio.gui
,
neobio.textui
Class Hierarchy
class java.lang.Object
class neobio.alignment.
AlignmentBlock
class neobio.alignment.
LocalAlignmentBlock
class neobio.alignment.
CharSequence
class java.awt.Component (implements java.awt.image.ImageObserver, java.awt.MenuContainer, java.io.Serializable)
class java.awt.Container
class javax.swing.JComponent (implements java.io.Serializable)
class javax.swing.JInternalFrame (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants)
class neobio.gui.
PairwiseAlignmentFrame
class java.awt.Window (implements javax.accessibility.Accessible)
class java.awt.Dialog
class javax.swing.JDialog (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants)
class neobio.gui.
AboutDialog
class java.awt.Frame (implements java.awt.MenuContainer)
class javax.swing.JFrame (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants)
class neobio.gui.
NeoBio
class neobio.alignment.
Factor
class neobio.alignment.
FactorSequence
class neobio.textui.
NeoBio
class neobio.alignment.
OutMatrix
(implements neobio.alignment.
Matrix
)
class neobio.alignment.
PairwiseAlignment
(implements java.io.Serializable)
class neobio.alignment.
PairwiseAlignmentAlgorithm
class neobio.alignment.
CrochemoreLandauZivUkelson
class neobio.alignment.
CrochemoreLandauZivUkelsonGlobalAlignment
class neobio.alignment.
CrochemoreLandauZivUkelsonLocalAlignment
class neobio.alignment.
NeedlemanWunsch
class neobio.alignment.
SmithWaterman
class neobio.textui.
RandomFactorSequenceGenerator
class neobio.textui.
RandomSequenceGenerator
class neobio.alignment.
ScoringScheme
class neobio.alignment.
BasicScoringScheme
class neobio.alignment.
ScoringMatrix
class neobio.alignment.
Smawk
class java.lang.Throwable (implements java.io.Serializable)
class java.lang.Exception
class neobio.alignment.
IncompatibleScoringSchemeException
class neobio.alignment.
InvalidScoringMatrixException
class neobio.alignment.
InvalidSequenceException
class neobio.alignment.
Trie
Interface Hierarchy
interface neobio.alignment.
Matrix
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