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OpenMS
2.4.0
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42 #include <boost/shared_ptr.hpp>
80 SIZE_OF_PROCESSINGACTION
83 static const std::string NamesOfProcessingAction[SIZE_OF_PROCESSINGACTION];
101 const Software & getSoftware()
const;
105 void setSoftware(
const Software & software);
108 const std::set<ProcessingAction> & getProcessingActions()
const;
110 std::set<ProcessingAction> & getProcessingActions();
112 void setProcessingActions(
const std::set<ProcessingAction> & actions);
115 const DateTime & getCompletionTime()
const;
117 void setCompletionTime(
const DateTime & completion_time);
Description of the software used for processing.
Definition: Software.h:48
@ NORMALIZATION
Normalization of intensity values.
Definition: DataProcessing.h:70
@ DATA_PROCESSING
General data processing (if no other term applies)
Definition: DataProcessing.h:60
@ CONVERSION_MZXML
Conversion to mzXML format.
Definition: DataProcessing.h:78
@ ALIGNMENT
Retention time alignment of different maps.
Definition: DataProcessing.h:68
bool operator!=(_Iterator< _Val, _Ref, _Ptr > const &, _Iterator< _Val, _Ref, _Ptr > const &)
Definition: KDTree.h:824
@ DEISOTOPING
Deisotoping.
Definition: DataProcessing.h:62
@ CONVERSION_MZML
Conversion to mzML format.
Definition: DataProcessing.h:77
boost::shared_ptr< DataProcessing > DataProcessingPtr
Definition: DataProcessing.h:126
Main OpenMS namespace.
Definition: FeatureDeconvolution.h:46
ProcessingAction
Definition: DataProcessing.h:58
DateTime completion_time_
Definition: DataProcessing.h:123
@ PEAK_PICKING
Peak picking (conversion from raw to peak data)
Definition: DataProcessing.h:67
Software software_
Definition: DataProcessing.h:121
@ FEATURE_GROUPING
Feature grouping
Definition: DataProcessing.h:73
@ CALIBRATION
Calibration of m/z positions.
Definition: DataProcessing.h:69
@ CHARGE_CALCULATION
Determination of the peak charge.
Definition: DataProcessing.h:64
@ CONVERSION_MZDATA
Conversion to mzData format.
Definition: DataProcessing.h:76
@ CHARGE_DECONVOLUTION
Charge deconvolution.
Definition: DataProcessing.h:61
@ PRECURSOR_RECALCULATION
Recalculation of precursor m/z.
Definition: DataProcessing.h:65
@ SMOOTHING
Smoothing of the signal to reduce noise.
Definition: DataProcessing.h:63
bool operator==(_Iterator< _Val, _Ref, _Ptr > const &, _Iterator< _Val, _Ref, _Ptr > const &)
Definition: KDTree.h:806
Description of the applied preprocessing steps.
Definition: DataProcessing.h:51
std::set< ProcessingAction > processing_actions_
Definition: DataProcessing.h:122
@ QUANTITATION
Quantitation.
Definition: DataProcessing.h:72
@ FORMAT_CONVERSION
General file format conversion (if no other term applies)
Definition: DataProcessing.h:75
@ IDENTIFICATION_MAPPING
Identification mapping
Definition: DataProcessing.h:74
@ CONVERSION_DTA
Conversion to DTA format.
Definition: DataProcessing.h:79
@ FILTERING
Data filtering or extraction.
Definition: DataProcessing.h:71
DateTime Class.
Definition: DateTime.h:54
boost::shared_ptr< const DataProcessing > ConstDataProcessingPtr
Definition: DataProcessing.h:127
@ BASELINE_REDUCTION
Baseline reduction.
Definition: DataProcessing.h:66