Class CollectWgsMetricsWithNonZeroCoverage.WgsMetricsWithNonZeroCoverageCollector

    • Constructor Detail

      • WgsMetricsWithNonZeroCoverageCollector

        public WgsMetricsWithNonZeroCoverageCollector​(CollectWgsMetricsWithNonZeroCoverage metrics,
                                                      int coverageCap,
                                                      htsjdk.samtools.util.IntervalList intervals)
    • Method Detail

      • getDepthHistogram

        protected htsjdk.samtools.util.Histogram<Integer> getDepthHistogram()
      • areHistogramsEmpty

        public boolean areHistogramsEmpty()