sampledoc
News and Announcements »

Navigation

  • index
  • Home »

QIIME DocumentationΒΆ

These pages provide references on different features of QIIME. If you’re instead looking for tutorials to guide you through different types of analyses, you should refer to the QIIME tutorials.

  • Biological Observation Matrix (biom) format
    • Motivation for changing the OTU Table Format
    • Converting between BIOM and tab-delimited table representations
  • Input Files
    • General suggestions for formatting your files
    • Metadata mapping files
    • Demultiplexed sequences
    • OTU table
    • ID-to-taxonomy map
    • QIIME parameters
    • Sample id map
  • Scripts - Analyses and Parameters
  • QIIME parameters files
    • Motivation
    • Format
    • Examples
    • Workflow scripts
    • Why is there no longer an example parameters file included with QIIME?
  • biom-format table objects
    • Motivation for the objects

Site index

    • Home
    • Install
    • Documentation
    • Tutorials
    • Blog
    • Developer

Quick search

Enter search terms or a module, class or function name.

Navigation

  • index
  • Home »

sampledoc
© Copyright 2010-2014, QIIME Team. Created using Sphinx 1.3.3.