NAME

csg_orientcorr - Part of the VOTCA package

SYNOPSIS

csg_orientcorr [OPTIONS]

csg_orientcorr [–help]

DESCRIPTION

Calculates the orientational correlation function <3/2*u(0)*u(r) - 1/2> for a polymer melt, where u is the vector pointing along a bond and r the distance between bond segments (centered on middle of bond).

The output is correlation.dat (with intra-molecular contributions) and correlation_excl.dat, where inter-molecular contributions are excluded.

OPTIONS

Allowed options:

  -h [ --help ]               display this help and exit
  --verbose                   be loud and noisy
  --verbose1                  be very loud and noisy
  -v [ --verbose2 ]           be extremly loud and noisy
  --top arg                   atomistic topology file

Neighbor search options:

  -c [ --cutoff ] arg (=1)  cutoff for the neighbor search
  --nbins arg (=40)         number of bins for the grid
  --nbmethod arg (=grid)    neighbor search algorithm (simple or grid)

Threading options:

  --nt arg (=1)               number of threads

Trajectory options:

  --trj arg                   atomistic trajectory file
  --begin arg (=0)            skip frames before this time (only works for
                            Gromacs files)
  --first-frame arg (=0)      start with this frame
  --nframes arg               process the given number of frames